SCOPe 2.02: Domain d2yjdb_: 2yjd B:

Lineage for d2yjdb_ (2yjd B:)

1. Root: SCOPe 2.02

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Estrogen receptor beta [48521] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48522] (26 PDB entries)

8. Domain d2yjdb_: 2yjd B: [196256]
   automated match to d1l2ja_
   complexed with yjd

Details for d2yjdb_

PDB Entry: 2yjd, 1.93 Å

PDB Description: stapled peptide bound to estrogen receptor beta

PDB Compounds: (B:) Estrogen receptor beta

SCOPe Domain Sequences for d2yjdb_:

Sequence, based on SEQRES records:

>d2yjdb_ a.123.1.1 (B:) Estrogen receptor beta {Human (Homo sapiens) [TaxId: 9606]}
lspeqlvltlleaepphvlisrpsapfteasmmmsltkladkelvhmiswakkipgfvel
slfdqvrllescwmevlmmglmwrsidhpgklifapdlvldrdegkcvegileifdmlla
ttsrfrelklqhkeylcvkamillnssmyplvtatqdadssrklahllnavtdalvwvia
ksgissqqqsmrlanllmllshvrhasnkgmehllnmkcknvvpvydlllemlna

Sequence, based on observed residues (ATOM records):

>d2yjdb_ a.123.1.1 (B:) Estrogen receptor beta {Human (Homo sapiens) [TaxId: 9606]}
lspeqlvltlleaepphvlisrpsapfteasmmmsltkladkelvhmiswakkipgfvel
slfdqvrllescwmevlmmglmwrsidhpgklifapdlvldrdegkcvegileifdmlla
ttsrfrelklqhkeylcvkamillnssssrklahllnavtdalvwviaksgissqqqsmr
lanllmllshvrhasnkgmehllnmkcknvvpvydlllemlna

Timeline for d2yjdb_:

• d2yjdb_ is new in SCOPe 2.02-stable
  
• d2yjdb_ appears in SCOPe 2.03
  
• d2yjdb_ appears in the current release, SCOPe 2.08