Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143071Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
    contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side
  4. 2143072Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families) (S)
  5. 2143188Family c.91.1.0: automated matches [196141] (1 protein)
    not a true family
  6. 2143189Protein automated matches [196142] (6 species)
    not a true protein

Species:

  1. 2143190Anaerobiospirillum succiniciproducens [TaxId:13335] [230436] (2 PDB entries)
    1. Domains for 1ytm:
      1. 2143191Domain d1ytma2: 1ytm A:221-518 [230437]
        Other proteins in same PDB: d1ytma1, d1ytmb1
        automated match to d1ayla1
        complexed with atp, mg, mn, oxd
      2. 2143192Domain d1ytmb2: 1ytm B:1221-1518 [230439]
        Other proteins in same PDB: d1ytma1, d1ytmb1
        automated match to d1ayla1
        complexed with atp, mg, mn, oxd
    2. Domains for 1yvy:
      1. 2143193Domain d1yvya2: 1yvy A:221-518 [241075]
        Other proteins in same PDB: d1yvya1, d1yvyb1
        automated match to d1ytma2
      2. 2143194Domain d1yvyb2: 1yvy B:1221-1518 [241077]
        Other proteins in same PDB: d1yvya1, d1yvyb1
        automated match to d1ytma2
  2. 2143195Chicken (Gallus gallus) [TaxId:9031] [225084] (4 PDB entries)
    1. Domains for 2faf:
      1. 2143196Domain d2fafa2: 2faf A:279-641 [204177]
        Other proteins in same PDB: d2fafa1, d2fafb1
        automated match to d1khba1
        complexed with 1pe, 20s, epe, mn
      2. 2143197Domain d2fafb2: 2faf B:279-641 [204179]
        Other proteins in same PDB: d2fafa1, d2fafb1
        automated match to d1khba1
        complexed with 1pe, 20s, epe, mn
    2. Domains for 2fag:
      1. 2143198Domain d2faga2: 2fag A:279-641 [303811]
        Other proteins in same PDB: d2faga1, d2fagb1
        automated match to d2zcia2
        complexed with 20s, epe, mn, pep
      2. 2143199Domain d2fagb2: 2fag B:279-641 [303813]
        Other proteins in same PDB: d2faga1, d2fagb1
        automated match to d2zcia2
        complexed with 20s, epe, mn, pep
    3. Domains for 2fah:
      1. 2143202Domain d2faha2: 2fah A:279-641 [204181]
        Other proteins in same PDB: d2faha1, d2fahb1, d2fahc1, d2fahd1
        automated match to d1khba1
        complexed with 20s, gdp, mla, mn
      2. 2143203Domain d2fahb2: 2fah B:279-641 [204183]
        Other proteins in same PDB: d2faha1, d2fahb1, d2fahc1, d2fahd1
        automated match to d1khba1
        complexed with 20s, gdp, mla, mn
      3. 2143204Domain d2fahc2: 2fah C:279-641 [204185]
        Other proteins in same PDB: d2faha1, d2fahb1, d2fahc1, d2fahd1
        automated match to d1khba1
        complexed with 20s, gdp, mla, mn
      4. 2143205Domain d2fahd2: 2fah D:279-641 [204187]
        Other proteins in same PDB: d2faha1, d2fahb1, d2fahc1, d2fahd1
        automated match to d1khba1
        complexed with 20s, gdp, mla, mn
    4. Domains for 2qzy:
      1. 2143200Domain d2qzya2: 2qzy A:279-641 [205917]
        Other proteins in same PDB: d2qzya1, d2qzyb1
        automated match to d1khba1
        complexed with 20s, epe, mn, pep
      2. 2143201Domain d2qzyb2: 2qzy B:279-641 [205919]
        Other proteins in same PDB: d2qzya1, d2qzyb1
        automated match to d1khba1
        complexed with 20s, epe, mn, pep
  3. 2143206Corynebacterium glutamicum [TaxId:1718] [225442] (1 PDB entry)
  4. 2143211Coxiella burnetii [TaxId:777] [196143] (1 PDB entry)
  5. 2143214Mycobacterium tuberculosis [TaxId:419947] [260617] (8 PDB entries)
    1. Domain for 4wie:
    2. Domain for 4wiu:
    3. Domain for 4wl8:
    4. Domain for 4wou:
    5. Domain for 4wpt:
    6. Domain for 4wpu:
    7. Domain for 4wpv:
    8. Domain for 5i67:
  6. 2143222Mycobacterium tuberculosis [TaxId:83332] [271220] (3 PDB entries)
    1. Domain for 4r43:
    2. Domain for 4rcg:
    3. Domain for 4rij:

More info for Protein automated matches from c.91.1.0: automated matches

Timeline for Protein automated matches from c.91.1.0: automated matches: