Lineage for d3sx5a1 (3sx5 A:64-349)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133477Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 protein domains)
    automatically mapped to Pfam PF03414
  6. 2133522Protein Glycosyltransferase A catalytic domain [75276] (1 species)
    involved in blood group antigen biosynthesis
  7. 2133523Species Human (Homo sapiens) [TaxId:9606] [75277] (53 PDB entries)
    Uniprot P16442 64-345
  8. 2133528Domain d3sx5a1: 3sx5 A:64-349 [195940]
    Other proteins in same PDB: d3sx5a2
    automated match to d2rj7a_
    complexed with gal, mn, peg, udp

Details for d3sx5a1

PDB Entry: 3sx5 (more details), 1.43 Å

PDB Description: Crystal structure of AABB+UDP+Gal with MPD as the cryoprotectant
PDB Compounds: (A:) Histo-blood group ABO system transferase

SCOPe Domain Sequences for d3sx5a1:

Sequence, based on SEQRES records: (download)

>d3sx5a1 c.68.1.9 (A:64-349) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpgfygssrea
ftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhq

Sequence, based on observed residues (ATOM records): (download)

>d3sx5a1 c.68.1.9 (A:64-349) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemiscerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpgfygssreaft
yerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdesh
lnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhq

SCOPe Domain Coordinates for d3sx5a1:

Click to download the PDB-style file with coordinates for d3sx5a1.
(The format of our PDB-style files is described here.)

Timeline for d3sx5a1:

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Domains from same chain:
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d3sx5a2