Lineage for Species: Human enterovirus 71 [TaxId: 39054]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075905Protein automated matches [190854] (15 species)
    not a true protein
  7. 2075942Species Human enterovirus 71 [TaxId:39054] [195913] (11 PDB entries)

PDB entries in Species: Human enterovirus 71 [TaxId: 39054]:

  1. Domain(s) for 3vbf:
  2. Domain(s) for 3vbh:
  3. Domain(s) for 3zfe:
  4. Domain(s) for 4cdq:
  5. Domain(s) for 4cdu:
  6. Domain(s) for 4cdw:
  7. Domain(s) for 4cdx:
  8. Domain(s) for 4cew:
  9. Domain(s) for 4cey:
  10. Domain(s) for 4rqp:
    1. 2075956Domain d4rqpb_: 4rqp B: [261955]
      Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
      automated match to d3vbhc_
    2. 2075957Domain d4rqpf_: 4rqp F: [261954]
      Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
      automated match to d3vbhc_
    3. 2075958Domain d4rqpj_: 4rqp J: [261957]
      Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
      automated match to d3vbhc_
    4. 2075959Domain d4rqpn_: 4rqp N: [261961]
      Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
      automated match to d3vbhc_
    5. 2075960Domain d4rqpr_: 4rqp R: [261966]
      Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
      automated match to d3vbhc_
  11. Domain(s) for 4rr3:
    1. 2075951Domain d4rr3b_: 4rr3 B: [267406]
      automated match to d3vbhc_
    2. 2075952Domain d4rr3f_: 4rr3 F: [267407]
      automated match to d3vbhc_
    3. 2075953Domain d4rr3j_: 4rr3 J: [267408]
      automated match to d3vbhc_
    4. 2075954Domain d4rr3n_: 4rr3 N: [267409]
      automated match to d3vbhc_
    5. 2075955Domain d4rr3r_: 4rr3 R: [267410]
      automated match to d3vbhc_

More info for Species Human enterovirus 71 [TaxId:39054] from b.121.4.1 automated matches

Timeline for Species Human enterovirus 71 [TaxId:39054] from b.121.4.1 automated matches: