SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.51: Eukaryotic type KH-domain (KH-domain type I) [54790] (1 superfamily)
beta-alpha(2)-beta(2)-alpha; 2 layers: alpha/beta
Superfamily d.51.1: Eukaryotic type KH-domain (KH-domain type I) [54791] (2 families)
Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I) [54792] (17 proteins)
an RNA-binding domain
Protein automated matches [195910] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [195911] (4 PDB entries)
1. Domains for 1ztg:
  1. Domain d1ztga1: 1ztg A:14-84 [241160]
    Other proteins in same PDB: d1ztga2, d1ztgb2, d1ztgc2, d1ztgd2
    automated match to d3vkea_
    protein/DNA complex; protein/RNA complex
  2. Domain d1ztgb1: 1ztg B:14-85 [241161]
    Other proteins in same PDB: d1ztga2, d1ztgb2, d1ztgc2, d1ztgd2
    automated match to d3vkea_
    protein/DNA complex; protein/RNA complex
  3. Domain d1ztgc1: 1ztg C:14-83 [241162]
    Other proteins in same PDB: d1ztga2, d1ztgb2, d1ztgc2, d1ztgd2
    automated match to d3vkea_
    protein/DNA complex; protein/RNA complex
  4. Domain d1ztgd1: 1ztg D:14-83 [241163]
    Other proteins in same PDB: d1ztga2, d1ztgb2, d1ztgc2, d1ztgd2
    automated match to d3vkea_
    protein/DNA complex; protein/RNA complex
2. Domain for 2opv:
  - Domain d2opva_: 2opv A: [243355]
    automated match to d1x4ma1
3. Domains for 3vke:
  1. Domain d3vkea1: 3vke A:14-86 [201246]
    Other proteins in same PDB: d3vkea2, d3vkea3, d3vkeb2, d3vkeb3, d3vkec2, d3vked2
    automated match to d3vkec_
    protein/DNA complex; protein/RNA complex
  2. Domain d3vkeb1: 3vke B:14-86 [201247]
    Other proteins in same PDB: d3vkea2, d3vkea3, d3vkeb2, d3vkeb3, d3vkec2, d3vked2
    automated match to d3vkec_
    protein/DNA complex; protein/RNA complex
  3. Domain d3vkec1: 3vke C:14-82 [195912]
    Other proteins in same PDB: d3vkea2, d3vkea3, d3vkeb2, d3vkeb3, d3vkec2, d3vked2
    automated match to d2axyb_
    protein/DNA complex; protein/RNA complex
  4. Domain d3vked1: 3vke D:14-84 [201248]
    Other proteins in same PDB: d3vkea2, d3vkea3, d3vkeb2, d3vkeb3, d3vkec2, d3vked2
    automated match to d3vkec_
    protein/DNA complex; protein/RNA complex
4. Domains for 4lij:
  1. Domain d4lija_: 4lij A: [229312]
    automated match to d1x4na1
    complexed with po4
  2. Domain d4lijb_: 4lij B: [235379]
    automated match to d4lija_
    complexed with po4
  3. Domain d4lijc_: 4lij C: [235380]
    automated match to d4lija_
    complexed with po4
Nematode (Caenorhabditis elegans) [TaxId:6239] [256433] (1 PDB entry)
- Domain for 2mjh:
  - Domain d2mjha_: 2mjh A: [256434]
    automated match to d2bl5a1
    protein/RNA complex

More info for Protein automated matches from d.51.1.1: Eukaryotic type KH-domain (KH-domain type I)

Timeline for Protein automated matches from d.51.1.1: Eukaryotic type KH-domain (KH-domain type I):

Protein automated matches from d.51.1.1: Eukaryotic type KH-domain (KH-domain type I) first appeared in SCOPe 2.02
Protein automated matches from d.51.1.1: Eukaryotic type KH-domain (KH-domain type I) appears in SCOPe 2.07