SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Clostridium difficile [TaxId: 272563]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164557Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2164558Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2164670Family d.21.1.0: automated matches [191386] (1 protein)
    not a true family
  6. 2164671Protein automated matches [190491] (14 species)
    not a true protein
  7. 2164692Species Clostridium difficile [TaxId:272563] [195841] (1 PDB entry)

PDB entry in Species: Clostridium difficile [TaxId: 272563]:

More info for Species Clostridium difficile [TaxId:272563] from d.21.1.0 automated matches

Timeline for Species Clostridium difficile [TaxId:272563] from d.21.1.0 automated matches: