SCOPe 2.04: Domain d3u1ub_: 3u1u B:

Lineage for d3u1ub_ (3u1u B:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.21: Plus3-like [159042] (1 family)
   automatically mapped to Pfam PF03126

5. Family b.34.21.1: Plus3 [159043] (2 proteins)
   Pfam PF03126

6. Protein RNA polymerase-associated protein RTF1 homolog [159044] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [159045] (3 PDB entries)
   Uniprot Q92541 307-442! Uniprot Q92541 313-444

8. Domain d3u1ub_: 3u1u B: [195654]
   automated match to d2db9a1
   complexed with gol, so4, unx

Details for d3u1ub_

PDB Entry: 3u1u, 1.8 Å

PDB Description: crystal structure of rna polymerase-associated protein rtf1 homolog plus-3 domain

PDB Compounds: (B:) RNA polymerase-associated protein RTF1 homolog

SCOPe Domain Sequences for d3u1ub_:

Sequence, based on SEQRES records:

>d3u1ub_ b.34.21.1 (B:) RNA polymerase-associated protein RTF1 homolog {Human (Homo sapiens) [TaxId: 9606]}
sqpvslpeelnrvrlsrhklerwchmpffaktvtgcfvrigignhnskpvyrvaeitgvv
etakvyqlggtrtnkglqlrhgndqrvfrlefvsnqeftesefmkwkeamfsagmqlptl
deinkkelsikea

Sequence, based on observed residues (ATOM records):

>d3u1ub_ b.34.21.1 (B:) RNA polymerase-associated protein RTF1 homolog {Human (Homo sapiens) [TaxId: 9606]}
sqpvslpeelnrvrlsrhklerwchmpffaktvtgcfvrigignpvyrvaeitgvvetak
vyqlggtrtnkglqlrhgndqrvfrlefvsnqeftesefmkwkeamfsagmqlptldein
kkelsikea

Timeline for d3u1ub_:

• d3u1ub_ first appeared in SCOPe 2.02
  
• d3u1ub_ appears in SCOPe 2.03
  
• d3u1ub_ appears in SCOPe 2.05
  
• d3u1ub_ appears in the current release, SCOPe 2.08