Lineage for d2ygyb_ (2ygy B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2420460Family c.1.10.1: Class I aldolase [51570] (13 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2421010Protein automated matches [190095] (23 species)
    not a true protein
  7. 2421066Species Escherichia coli [TaxId:469008] [189446] (6 PDB entries)
  8. 2421074Domain d2ygyb_: 2ygy B: [195648]
    Other proteins in same PDB: d2ygya2, d2ygyd2
    automated match to d2wo5a_
    complexed with 1pe, cl

Details for d2ygyb_

PDB Entry: 2ygy (more details), 1.9 Å

PDB Description: structure of wild type e. coli n-acetylneuraminic acid lyase in space group p21 crystal form ii
PDB Compounds: (B:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d2ygyb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ygyb_ c.1.10.1 (B:) automated matches {Escherichia coli [TaxId: 469008]}

SCOPe Domain Coordinates for d2ygyb_:

Click to download the PDB-style file with coordinates for d2ygyb_.
(The format of our PDB-style files is described here.)

Timeline for d2ygyb_: