Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2363257Superfamily b.1.28: NEAT domain-like [158911] (2 families) (S)
  5. 2363303Family b.1.28.0: automated matches [195425] (1 protein)
    not a true family
  6. 2363304Protein automated matches [195426] (6 species)
    not a true protein

Species:

  1. 2363305Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [195437] (5 PDB entries)
    1. Domains for 3sik:
      1. 2363309Domain d3sika_: 3sik A: [195439]
        automated match to d2o6pb1
        complexed with hem
      2. 2363310Domain d3sikb_: 3sik B: [195438]
        automated match to d2o6pb1
        complexed with hem
    2. Domains for 3sz6:
      1. 2363307Domain d3sz6a_: 3sz6 A: [195701]
        automated match to d2o1aa1
        complexed with cl, gol
      2. 2363308Domain d3sz6b_: 3sz6 B: [195700]
        automated match to d2o1aa1
        complexed with cl, gol
    3. Domain for 4h8p:
    4. Domain for 4h8q:
    5. Domains for 4ymp:
      1. 2363312Domain d4ympa_: 4ymp A: [319828]
        automated match to d4h8qa_
        complexed with hem
      2. 2363313Domain d4ympc_: 4ymp C: [319869]
        automated match to d4h8qa_
        complexed with hem
  2. 2363314Listeria monocytogenes [TaxId:1639] [260500] (2 PDB entries)
    1. Domains for 4myp:
      1. 2363315Domain d4mypa_: 4myp A: [260504]
        automated match to d3sika_
        complexed with gol, hem, zn
      2. 2363316Domain d4mypb_: 4myp B: [260503]
        automated match to d3sika_
        complexed with gol, hem, zn
    2. Domain for 4nla:
  3. 2363318Staphylococcus aureus [TaxId:158878] [256044] (1 PDB entry)
  4. 2363321Staphylococcus aureus [TaxId:158879] [233500] (7 PDB entries)
    1. Domains for 2e7d:
      1. 2363331Domain d2e7da_: 2e7d A: [241698]
        automated match to d3rtlb_
        complexed with act, gol, so4
      2. 2363332Domain d2e7db_: 2e7d B: [241699]
        automated match to d3rtlb_
        complexed with act, gol, so4
    2. Domain for 2z6f:
    3. Domains for 3quh:
      1. 2363339Domain d3quha_: 3quh A: [248998]
        automated match to d3rtlb_
        complexed with gol, mnr
      2. 2363340Domain d3quhb_: 3quh B: [248999]
        automated match to d3rtlb_
        complexed with gol, mnr
    4. Domains for 3rtl:
      1. 2363322Domain d3rtla1: 3rtl A:341-452 [233501]
        Other proteins in same PDB: d3rtla2, d3rtlb2, d3rtlc2, d3rtld2
        automated match to d3sika_
        complexed with cl, hem, mg
      2. 2363323Domain d3rtlb1: 3rtl B:341-458 [233502]
        Other proteins in same PDB: d3rtla2, d3rtlb2, d3rtlc2, d3rtld2
        automated match to d3sika_
        complexed with cl, hem, mg
      3. 2363324Domain d3rtlc1: 3rtl C:341-458 [239705]
        Other proteins in same PDB: d3rtla2, d3rtlb2, d3rtlc2, d3rtld2
        automated match to d3rtlb_
        complexed with cl, hem, mg
      4. 2363325Domain d3rtld1: 3rtl D:341-456 [239706]
        Other proteins in same PDB: d3rtla2, d3rtlb2, d3rtlc2, d3rtld2
        automated match to d3rtlb_
        complexed with cl, hem, mg
    5. Domains for 3rur:
      1. 2363327Domain d3rura_: 3rur A: [249217]
        Other proteins in same PDB: d3rurb2, d3rurc2, d3rurd2
        automated match to d3rtlb_
        complexed with hem, mg
      2. 2363328Domain d3rurb1: 3rur B:341-455 [249218]
        Other proteins in same PDB: d3rurb2, d3rurc2, d3rurd2
        automated match to d3rtlb_
        complexed with hem, mg
      3. 2363329Domain d3rurc1: 3rur C:341-456 [249219]
        Other proteins in same PDB: d3rurb2, d3rurc2, d3rurd2
        automated match to d3rtlb_
        complexed with hem, mg
      4. 2363330Domain d3rurd1: 3rur D:341-454 [249220]
        Other proteins in same PDB: d3rurb2, d3rurc2, d3rurd2
        automated match to d3rtlb_
        complexed with hem, mg
    6. Domains for 3vtm:
      1. 2363341Domain d3vtma_: 3vtm A: [250678]
        automated match to d3rtlb_
        complexed with 3zz, gol
      2. 2363342Domain d3vtmb_: 3vtm B: [250679]
        automated match to d3rtlb_
        complexed with 3zz, gol
    7. Domains for 3vua:
      1. 2363333Domain d3vuaa_: 3vua A: [250683]
        automated match to d3rtlb_
        complexed with act, gol, so4
      2. 2363334Domain d3vuab_: 3vua B: [250684]
        automated match to d3rtlb_
        complexed with act, gol, so4
      3. 2363335Domain d3vuac_: 3vua C: [250685]
        automated match to d3rtlb_
        complexed with act, gol, so4
      4. 2363336Domain d3vuad_: 3vua D: [250686]
        automated match to d3rtlb_
        complexed with act, gol, so4
      5. 2363337Domain d3vuae_: 3vua E: [250687]
        automated match to d3rtlb_
        complexed with act, gol, so4
      6. 2363338Domain d3vuaf_: 3vua F: [250688]
        automated match to d3rtlb_
        complexed with act, gol, so4
  5. 2363343Staphylococcus aureus [TaxId:196620] [226676] (2 PDB entries)
    1. Domain for 2moq:
    2. Domain for 4fc3:
  6. 2363346Staphylococcus aureus [TaxId:282459] [322571] (1 PDB entry)

More info for Protein automated matches from b.1.28.0: automated matches

Timeline for Protein automated matches from b.1.28.0: automated matches: