SCOPe 2.06: Domain d4exqa1: 4exq A:1-359

Lineage for d4exqa1 (4exq A:1-359)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.22: UROD/MetE-like [51726] (3 families)

5. Family c.1.22.1: Uroporphyrinogen decarboxylase, UROD [51727] (2 proteins)
   automatically mapped to Pfam PF01208

6. Protein automated matches [195370] (3 species)
   not a true protein

7. Species Burkholderia thailandensis [TaxId:271848] [195371] (1 PDB entry)

8. Domain d4exqa1: 4exq A:1-359 [195372]
   Other proteins in same PDB: d4exqa2
   automated match to d3cyva_
   complexed with na

Details for d4exqa1

PDB Entry: 4exq, 1.65 Å

PDB Description: crystal structure of uroporphyrinogen decarboxylase (upd) from burkholderia thailandensis e264

PDB Compounds: (A:) Uroporphyrinogen decarboxylase

SCOPe Domain Sequences for d4exqa1:

Sequence, based on SEQRES records:

>d4exqa1 c.1.22.1 (A:1-359) automated matches {Burkholderia thailandensis [TaxId: 271848]}
maqtlindtflrallreptdytpiwlmrqagrylpeynatraragsflglakhpdyatev
tlqplerfpldaailfsdiltipdamglgldfaagegpkfahpvrteadvaklavpdiga
tlgyvtdavreirraltdgegrqrvpligfsgspwtlacymvegggsddfrtvksmayar
pdlmhrildvnaqavaaylnaqieagaqavmifdtwggaladgayqrfsldyirrvvaql
krehdgarvpaiaftkggglwledlaatgvdavgldwtvnlgrarervagrvalqgnldp
tilfappeairaearavldsygnhpghvfnlghgisqftppehvaelvdevhrhsrair

Sequence, based on observed residues (ATOM records):

>d4exqa1 c.1.22.1 (A:1-359) automated matches {Burkholderia thailandensis [TaxId: 271848]}
maqtlindtflrallreptdytpiwlmrqagrylpeynatraragsflglakhpdyatev
tlqplerfpldaailfsdiltipdamglgldfgpkfahpvrteadvaklavpdigatlgy
vtdavreirraltdgegrqrvpligfsgspwtlacymvegggsddfrtvksmayarpdlm
hrildvnaqavaaylnaqieagaqavmifdtwggaladgayqrfsldyirrvvaqlkreh
dgarvpaiaftkggglwledlaatgvdavgldwtvnlgrarervagrvalqgnldptilf
appeairaearavldsygnhpghvfnlghgisqftppehvaelvdevhrhsrair

Timeline for d4exqa1:

• d4exqa1 first appeared in SCOPe 2.02, called d4exqa_
  
• d4exqa1 was called d4exqa_ in SCOPe 2.05
  
• d4exqa1 appears in SCOPe 2.07
  
• d4exqa1 appears in the current release, SCOPe 2.08