SCOPe 2.05: Domain d4exqa_: 4exq A:

Lineage for d4exqa_ (4exq A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.22: UROD/MetE-like [51726] (3 families)

5. Family c.1.22.1: Uroporphyrinogen decarboxylase, UROD [51727] (2 proteins)
   automatically mapped to Pfam PF01208

6. Protein automated matches [195370] (3 species)
   not a true protein

7. Species Burkholderia thailandensis [TaxId:271848] [195371] (1 PDB entry)

8. Domain d4exqa_: 4exq A: [195372]
   automated match to d3cyva_
   complexed with na

Details for d4exqa_

PDB Entry: 4exq, 1.65 Å

PDB Description: crystal structure of uroporphyrinogen decarboxylase (upd) from burkholderia thailandensis e264

PDB Compounds: (A:) Uroporphyrinogen decarboxylase

SCOPe Domain Sequences for d4exqa_:

Sequence, based on SEQRES records:

>d4exqa_ c.1.22.1 (A:) automated matches {Burkholderia thailandensis [TaxId: 271848]}
gsmaqtlindtflrallreptdytpiwlmrqagrylpeynatraragsflglakhpdyat
evtlqplerfpldaailfsdiltipdamglgldfaagegpkfahpvrteadvaklavpdi
gatlgyvtdavreirraltdgegrqrvpligfsgspwtlacymvegggsddfrtvksmay
arpdlmhrildvnaqavaaylnaqieagaqavmifdtwggaladgayqrfsldyirrvva
qlkrehdgarvpaiaftkggglwledlaatgvdavgldwtvnlgrarervagrvalqgnl
dptilfappeairaearavldsygnhpghvfnlghgisqftppehvaelvdevhrhsrai
r

Sequence, based on observed residues (ATOM records):

>d4exqa_ c.1.22.1 (A:) automated matches {Burkholderia thailandensis [TaxId: 271848]}
gsmaqtlindtflrallreptdytpiwlmrqagrylpeynatraragsflglakhpdyat
evtlqplerfpldaailfsdiltipdamglgldfgpkfahpvrteadvaklavpdigatl
gyvtdavreirraltdgegrqrvpligfsgspwtlacymvegggsddfrtvksmayarpd
lmhrildvnaqavaaylnaqieagaqavmifdtwggaladgayqrfsldyirrvvaqlkr
ehdgarvpaiaftkggglwledlaatgvdavgldwtvnlgrarervagrvalqgnldpti
lfappeairaearavldsygnhpghvfnlghgisqftppehvaelvdevhrhsrair

Timeline for d4exqa_:

• d4exqa_ first appeared in SCOPe 2.02
  
• d4exqa_ appears in SCOPe 2.04
  
• d4exqa_ is called d4exqa1 in SCOPe 2.06
  
• d4exqa_ appears in the current release, SCOPe 2.08, called d4exqa1