SCOPe 2.06: Domain d4dm9a_: 4dm9 A:

Lineage for d4dm9a_ (4dm9 A:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.6: Ubiquitin carboxyl-terminal hydrolase UCH-L [54050] (3 proteins)
   automatically mapped to Pfam PF01088

6. Protein Ubiquitin carboxyl-terminal hydrolase isozyme l1 [142856] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [142857] (4 PDB entries)
   Uniprot P09936 1-223

8. Domain d4dm9a_: 4dm9 A: [195339]
   automated match to d2etla1

Details for d4dm9a_

PDB Entry: 4dm9, 2.35 Å

PDB Description: The Crystal Structure of Ubiquitin Carboxy-terminal hydrolase L1 (UCHL1) bound to a tripeptide fluoromethyl ketone Z-VAE(OMe)-FMK

PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase isozyme L1

SCOPe Domain Sequences for d4dm9a_:

Sequence; same for both SEQRES and ATOM records:

>d4dm9a_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]}
mqlkpmeinpemlnkvlsrlgvagqwrfvdvlgleeeslgsvpapacallllfpltaqhe
nfrkkqieelkgqevspkvyfmkqtignscgtiglihavannqdklgfedgsvlkqflse
tekmspedrakcfekneaiqaahdavaqegqcrvddkvnfhfilfnnvdghlyeldgrmp
fpvnhgassedtllkdaakvcreftereqgevrfsavalckaa

Timeline for d4dm9a_:

• d4dm9a_ first appeared in SCOPe 2.02
  
• d4dm9a_ appears in SCOPe 2.05
  
• d4dm9a_ appears in SCOPe 2.07
  
• d4dm9a_ appears in the current release, SCOPe 2.08