Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150209Family c.116.1.3: YbeA-like [82371] (5 protein domains)
    Pfam PF02590
  6. 2150235Protein automated matches [195222] (2 species)
    not a true protein

Species:

  1. 2150236Staphylococcus aureus [TaxId:1280] [195223] (1 PDB entry)
  2. 2290562Escherichia coli [TaxId:562] [333863] (2 PDB entries)
    1. Domains for 5twj:
      1. 2290576Domain d5twjb1: 5twj B:2-155 [333877]
        Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sam
      2. 2290599Domain d5twja1: 5twj A:2-155 [333900]
        Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sam
      3. 2290607Domain d5twjc1: 5twj C:2-155 [333908]
        Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sam
      4. 2290715Domain d5twjd1: 5twj D:2-155 [334016]
        Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sam
    2. Domains for 5twk:
      1. 2290563Domain d5twka1: 5twk A:2-155 [333864]
        Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sfg
      2. 2290584Domain d5twkb1: 5twk B:2-155 [333885]
        Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sfg
      3. 2290586Domain d5twkc1: 5twk C:2-155 [333887]
        Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sfg
      4. 2290660Domain d5twkd1: 5twk D:2-155 [333961]
        Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
        automated match to d1ns5b_
        protein/RNA complex; complexed with sfg

More info for Protein automated matches from c.116.1.3: YbeA-like

Timeline for Protein automated matches from c.116.1.3: YbeA-like: