SCOPe 2.06: Domain d3runa_: 3run A:

Lineage for d3runa_ (3run A:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.2: Lysozyme-like [53954] (1 superfamily)
   common alpha+beta motif for the active site region

4. Superfamily d.2.1: Lysozyme-like [53955] (12 families)

5. Family d.2.1.3: Phage lysozyme [53981] (4 proteins)

6. Protein Phage T4 lysozyme [53982] (1 species)

7. Species Bacteriophage T4 [TaxId:10665] [53983] (570 PDB entries)
   Uniprot P00720
   many mutant structures

8. Domain d3runa_: 3run A: [195218]
   automated match to d212la_
   complexed with cl, ipa, mpd, mrd, po4, trs

Details for d3runa_

PDB Entry: 3run, 1.4 Å

PDB Description: new strategy to analyze structures of glycopeptide antibiotic-target complexes

PDB Compounds: (A:) lysozyme

SCOPe Domain Sequences for d3runa_:

Sequence; same for both SEQRES and ATOM records:

>d3runa_ d.2.1.3 (A:) Phage T4 lysozyme {Bacteriophage T4 [TaxId: 10665]}
mnifemlrideglrlkiykdtegyytigighlltkspslnaakseldkaigrntngvitk
deaeklfnqdvdaavrgilrnaklkpvydsldavrraalinmvfqmgetgvagftnslrm
lqqkrwdeaavnlaksrwynqtpnrakrvittfrtgtwdayknackaa

Timeline for d3runa_:

• d3runa_ first appeared in SCOPe 2.02
  
• d3runa_ appears in SCOPe 2.05
  
• d3runa_ appears in SCOPe 2.07
  
• d3runa_ appears in the current release, SCOPe 2.08