Lineage for d2yjta_ (2yjt A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097883Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 2098336Superfamily c.8.7: RraA-like [89562] (2 families) (S)
    structural similarity and possible distant homology to the phosphohistidine domain of pyruvate phosphate dikinase
  5. 2098337Family c.8.7.1: RraA-like [89563] (5 protein domains)
    aka MenG-like; characterized as regulator of RNase E activity A (RraA) that globally modulates RNA abundance in E. coli
    automatically mapped to Pfam PF03737
  6. 2098359Protein automated matches [195200] (1 species)
    not a true protein
  7. 2098360Species Escherichia coli K-12 [TaxId:83333] [195201] (1 PDB entry)
  8. 2098361Domain d2yjta_: 2yjt A: [195203]
    automated match to d1q5xa_
    protein/RNA complex

Details for d2yjta_

PDB Entry: 2yjt (more details), 2.9 Å

PDB Description: Crystal structure of E. coli DEAD-box protein SrmB bound to regulator of ribonuclease activity A (RraA)
PDB Compounds: (A:) Regulator of ribonuclease activity A

SCOPe Domain Sequences for d2yjta_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2yjta_ c.8.7.1 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]}

SCOPe Domain Coordinates for d2yjta_:

Click to download the PDB-style file with coordinates for d2yjta_.
(The format of our PDB-style files is described here.)

Timeline for d2yjta_: