Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1906287Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 1911709Superfamily d.58.56: CcmK-like [143414] (2 families) (S)
    contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape
  5. 1911789Family d.58.56.0: automated matches [195116] (1 protein)
    not a true family
  6. 1911790Protein automated matches [195117] (9 species)
    not a true protein

Species:

  1. 1911791Aeromonas hydrophila [TaxId:380703] [275924] (1 PDB entry)
  2. 1911795Citrobacter freundii [TaxId:546] [257443] (2 PDB entries)
    1. Domains for 4p7t:
      1. 1911796Domain d4p7ta_: 4p7t A: [257444]
        automated match to d3mpya_
      2. 1911797Domain d4p7tb_: 4p7t B: [263448]
        automated match to d4ppda_
      3. 1911798Domain d4p7tc_: 4p7t C: [263449]
        automated match to d4ppda_
      4. 1911799Domain d4p7td_: 4p7t D: [263450]
        automated match to d4ppda_
      5. 1911800Domain d4p7te_: 4p7t E: [259912]
        automated match to d3mpya_
      6. 1911801Domain d4p7tf_: 4p7t F: [263451]
        automated match to d4ppda_
    2. Domains for 4p7v:
      1. 1911802Domain d4p7va_: 4p7v A: [257445]
        automated match to d3mpya_
        complexed with gol
      2. 1911803Domain d4p7vb_: 4p7v B: [263452]
        automated match to d4ppda_
        complexed with gol
      3. 1911804Domain d4p7vc_: 4p7v C: [263453]
        automated match to d4ppda_
        complexed with gol
      4. 1911805Domain d4p7vd_: 4p7v D: [259911]
        automated match to d3mpya_
        complexed with gol
      5. 1911806Domain d4p7ve_: 4p7v E: [263454]
        automated match to d4ppda_
        complexed with gol
      6. 1911807Domain d4p7vf_: 4p7v F: [263455]
        automated match to d4ppda_
        complexed with gol
  3. 1911808Clostridium difficile [TaxId:272563] [195118] (1 PDB entry)
  4. 1911812Escherichia coli K-12 [TaxId:83333] [225811] (3 PDB entries)
    1. Domains for 3i6p:
      1. 1911814Domain d3i6pa_: 3i6p A: [211534]
        automated match to d2a10d_
        complexed with so4
      2. 1911815Domain d3i6pb_: 3i6p B: [211535]
        automated match to d2a10d_
        complexed with so4
      3. 1911816Domain d3i6pc_: 3i6p C: [211536]
        automated match to d2a10d_
        complexed with so4
      4. 1911817Domain d3i6pd_: 3i6p D: [211537]
        automated match to d2a10d_
        complexed with so4
      5. 1911818Domain d3i6pe_: 3i6p E: [211538]
        automated match to d2a10d_
        complexed with so4
      6. 1911819Domain d3i6pf_: 3i6p F: [211539]
        automated match to d2a10d_
        complexed with so4
    2. Domains for 3mpw:
      1. 1911820Domain d3mpwa_: 3mpw A: [213543]
        automated match to d2a10b_
        complexed with po4
      2. 1911821Domain d3mpwb_: 3mpw B: [213544]
        automated match to d2a10b_
        complexed with po4
      3. 1911822Domain d3mpwc_: 3mpw C: [213545]
        automated match to d2a10b_
        complexed with po4
      4. 1911823Domain d3mpwd_: 3mpw D: [213546]
        automated match to d2a10b_
        complexed with po4
      5. 1911824Domain d3mpwe_: 3mpw E: [213547]
        automated match to d2a10b_
        complexed with po4
      6. 1911825Domain d3mpwf_: 3mpw F: [213548]
        automated match to d2a10b_
        complexed with po4
      7. 1911826Domain d3mpwg_: 3mpw G: [213549]
        automated match to d2a10b_
        complexed with po4
      8. 1911827Domain d3mpwh_: 3mpw H: [213550]
        automated match to d2a10b_
        complexed with po4
      9. 1911828Domain d3mpwi_: 3mpw I: [213551]
        automated match to d2a10b_
        complexed with po4
      10. 1911829Domain d3mpwj_: 3mpw J: [213552]
        automated match to d2a10b_
        complexed with po4
      11. 1911830Domain d3mpwk_: 3mpw K: [213553]
        automated match to d2a10b_
        complexed with po4
      12. 1911831Domain d3mpwl_: 3mpw L: [213554]
        automated match to d2a10b_
        complexed with po4
    3. Domain for 3mpy:
  5. 1911832Haliangium ochraceum [TaxId:502025] [279894] (1 PDB entry)
  6. 1911841Prochlorococcus marinus [TaxId:74547] [259233] (1 PDB entry)
  7. 1911848Salmonella enterica [TaxId:702982] [257392] (1 PDB entry)
  8. 1911858Salmonella enterica [TaxId:90371] [225986] (1 PDB entry)
  9. 1911860Salmonella enterica [TaxId:99287] [257522] (6 PDB entries)
    1. Domains for 4ppd:
      1. 1911870Domain d4ppda_: 4ppd A: [257523]
        automated match to d2a10d_
        complexed with gol, so4
      2. 1911871Domain d4ppdb_: 4ppd B: [263561]
        automated match to d4ppda_
        complexed with gol, so4
      3. 1911872Domain d4ppdc_: 4ppd C: [263562]
        automated match to d4ppda_
        complexed with gol, so4
      4. 1911873Domain d4ppdd_: 4ppd D: [263563]
        automated match to d4ppda_
        complexed with gol, so4
      5. 1911874Domain d4ppde_: 4ppd E: [263564]
        automated match to d4ppda_
        complexed with gol, so4
      6. 1911875Domain d4ppdf_: 4ppd F: [263565]
        automated match to d4ppda_
        complexed with gol, so4
      7. 1911876Domain d4ppdg_: 4ppd G: [263566]
        automated match to d4ppda_
        complexed with gol, so4
    2. Domains for 4qie:
      1. 1911880Domain d4qiea_: 4qie A: [273649]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      2. 1911881Domain d4qieb_: 4qie B: [273645]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      3. 1911882Domain d4qiec_: 4qie C: [273644]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      4. 1911883Domain d4qied_: 4qie D: [273647]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      5. 1911884Domain d4qiee_: 4qie E: [273651]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      6. 1911885Domain d4qief_: 4qie F: [273652]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      7. 1911886Domain d4qieg_: 4qie G: [273650]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      8. 1911887Domain d4qieh_: 4qie H: [273646]
        automated match to d2a10f_
        complexed with gol, so4; mutant
      9. 1911888Domain d4qiei_: 4qie I: [273648]
        automated match to d2a10f_
        complexed with gol, so4; mutant
    3. Domains for 4qif:
      1. 1911861Domain d4qifa_: 4qif A: [269273]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      2. 1911862Domain d4qifb_: 4qif B: [269276]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      3. 1911863Domain d4qifc_: 4qif C: [269274]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      4. 1911864Domain d4qifd_: 4qif D: [269275]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      5. 1911865Domain d4qife_: 4qif E: [269279]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      6. 1911866Domain d4qiff_: 4qif F: [269277]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      7. 1911867Domain d4qifg_: 4qif G: [269278]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      8. 1911868Domain d4qifh_: 4qif H: [269280]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
      9. 1911869Domain d4qifi_: 4qif I: [269285]
        automated match to d2a10f_
        complexed with gol, k, pgo, so4, tar; mutant
    4. Domains for 4rbt:
      1. 1911877Domain d4rbta_: 4rbt A: [269841]
        automated match to d4ppda_
        complexed with so4; mutant
      2. 1911878Domain d4rbtb_: 4rbt B: [269840]
        automated match to d4ppda_
        complexed with so4; mutant
      3. 1911879Domain d4rbtc_: 4rbt C: [269839]
        automated match to d4ppda_
        complexed with so4; mutant
    5. Domains for 4rbu:
      1. 1911889Domain d4rbua_: 4rbu A: [269829]
        automated match to d4ppda_
        complexed with so4; mutant
      2. 1911890Domain d4rbub_: 4rbu B: [269828]
        automated match to d4ppda_
        complexed with so4; mutant
      3. 1911891Domain d4rbuc_: 4rbu C: [269825]
        automated match to d4ppda_
        complexed with so4; mutant
      4. 1911892Domain d4rbud_: 4rbu D: [269827]
        automated match to d4ppda_
        complexed with so4; mutant
      5. 1911893Domain d4rbue_: 4rbu E: [269826]
        automated match to d4ppda_
        complexed with so4; mutant
      6. 1911894Domain d4rbuf_: 4rbu F: [269832]
        automated match to d4ppda_
        complexed with so4; mutant
      7. 1911895Domain d4rbug_: 4rbu G: [269831]
        automated match to d4ppda_
        complexed with so4; mutant
      8. 1911896Domain d4rbuh_: 4rbu H: [269830]
        automated match to d4ppda_
        complexed with so4; mutant
      9. 1911897Domain d4rbui_: 4rbu I: [269833]
        automated match to d4ppda_
        complexed with so4; mutant
    6. Domains for 4rbv:
      1. 1911898Domain d4rbva_: 4rbv A: [269835]
        automated match to d4ppda_
        complexed with so4; mutant
      2. 1911899Domain d4rbvb_: 4rbv B: [269837]
        automated match to d4ppda_
        complexed with so4; mutant
      3. 1911900Domain d4rbvc_: 4rbv C: [269836]
        automated match to d4ppda_
        complexed with so4; mutant
      4. 1911901Domain d4rbvd_: 4rbv D: [269838]
        automated match to d4ppda_
        complexed with so4; mutant
      5. 1911902Domain d4rbve_: 4rbv E: [269843]
        automated match to d4ppda_
        complexed with so4; mutant
      6. 1911903Domain d4rbvf_: 4rbv F: [269844]
        automated match to d4ppda_
        complexed with so4; mutant
      7. 1911904Domain d4rbvg_: 4rbv G: [269842]
        automated match to d4ppda_
        complexed with so4; mutant

More info for Protein automated matches from d.58.56.0: automated matches

Timeline for Protein automated matches from d.58.56.0: automated matches: