SCOPe 2.06: Domain d3vk4a_: 3vk4 A:

Lineage for d3vk4a_ (3vk4 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)

6. Protein automated matches [190399] (9 species)
   not a true protein

7. Species Pseudomonas putida [TaxId:303] [187269] (4 PDB entries)

8. Domain d3vk4a_: 3vk4 A: [194665]
   automated match to d1ukja_
   complexed with hcs; mutant

Details for d3vk4a_

PDB Entry: 3vk4, 2.61 Å

PDB Description: crystal structure of l-methionine gamma-lyase from pseudomonas putida c116h mutant complexed with l-homocysteine

PDB Compounds: (A:) methionine gamma-lyase

SCOPe Domain Sequences for d3vk4a_:

Sequence; same for both SEQRES and ATOM records:

>d3vk4a_ c.67.1.3 (A:) automated matches {Pseudomonas putida [TaxId: 303]}
lpgfatraihhgydpqdhggalvppvyqtatftfptveygaacfageqaghfysrisnpt
lnllearmasleggeaglalasgmgaitstlwtllrpgdevllgntlyghtfaflhhgig
efgvklrhvdmadlqaleaamtpatrviyfespanpnmhmadiagvakiarkhgatvvvd
ntyctpylqrplelgadlvvhsatkylsghgditagivvgsqalvdrirlqglkdmtgav
lsphdaallmrgiktlnlrmdrhcanaqvlaeflarqpqvelihypglasfpqytlarqq
msqpggmiafelkggigagrrfmnalqlfsravslgdaeslaqhpasmthssytpeerah
ygiseglvrlsvglediddlladvqqalkasa

Timeline for d3vk4a_:

• d3vk4a_ first appeared in SCOPe 2.02
  
• d3vk4a_ appears in SCOPe 2.05
  
• d3vk4a_ appears in SCOPe 2.07
  
• d3vk4a_ appears in the current release, SCOPe 2.08