SCOPe 2.08: Domain d3v6cb1: 3v6c B:-2-74

Lineage for d3v6cb1 (3v6c B:-2-74)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d3v6cb1: 3v6c B:-2-74 [194204]
   Other proteins in same PDB: d3v6ca_, d3v6cb2
   automated match to d2c7nb1
   complexed with cl, gol, zn

Details for d3v6cb1

PDB Entry: 3v6c, 1.7 Å

PDB Description: crystal structure of usp2 in complex with mutated ubiquitin

PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d3v6cb1:

Sequence; same for both SEQRES and ATOM records:

>d3v6cb1 d.15.1.1 (B:-2-74) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
rgsmqifvntltgthitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtls
dyniqkestlhlvlrlr

Timeline for d3v6cb1:

• d3v6cb1 first appeared in SCOPe 2.02, called d3v6cb_
  
• d3v6cb1 appears in SCOPe 2.07