Lineage for Species: Brevundimonas diminuta [TaxId: 293]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. Family c.1.9.3: Phosphotriesterase-like [51564] (3 proteins)
    automatically mapped to Pfam PF02126
  6. Protein automated matches [190258] (3 species)
    not a true protein
  7. Species Brevundimonas diminuta [TaxId:293] [194088] (25 PDB entries)

PDB entries in Species: Brevundimonas diminuta [TaxId: 293]:

  1. Domain(s) for 4e3t:
    1. Domain d4e3ta_: 4e3t A: [194090]
      automated match to d1qw7a_
      complexed with hln, zn
    2. Domain d4e3tb_: 4e3t B: [194089]
      automated match to d1qw7a_
      complexed with hln, zn
  2. Domain(s) for 4pbf:
    1. Domain d4pbfa_: 4pbf A: [272288]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4pbfb_: 4pbf B: [272300]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  3. Domain(s) for 4pcn:
    1. Domain d4pcna_: 4pcn A: [272292]
      automated match to d1qw7a_
      complexed with mpd, zn
    2. Domain d4pcnb_: 4pcn B: [272293]
      automated match to d1qw7a_
      complexed with mpd, zn
  4. Domain(s) for 4pcp:
    1. Domain d4pcpa_: 4pcp A: [272287]
      automated match to d1jgma_
      complexed with cac, zn
    2. Domain d4pcpg_: 4pcp G: [272290]
      automated match to d1jgma_
      complexed with cac, zn
  5. Domain(s) for 4xaf:
    1. Domain d4xafa_: 4xaf A: [279941]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xafg_: 4xaf G: [279942]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  6. Domain(s) for 4xag:
    1. Domain d4xaga_: 4xag A: [279937]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xagg_: 4xag G: [279945]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  7. Domain(s) for 4xay:
    1. Domain d4xaya_: 4xay A: [279944]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xayg_: 4xay G: [279943]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  8. Domain(s) for 4xaz:
    1. Domain d4xaza_: 4xaz A: [279938]
      automated match to d1qw7a_
      complexed with mpd, zn
    2. Domain d4xazg_: 4xaz G: [279940]
      automated match to d1qw7a_
      complexed with mpd, zn
  9. Domain(s) for 4xd3:
    1. Domain d4xd3a_: 4xd3 A: [280097]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xd3g_: 4xd3 G: [280096]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  10. Domain(s) for 4xd4:
    1. Domain d4xd4a_: 4xd4 A: [280100]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xd4g_: 4xd4 G: [280102]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  11. Domain(s) for 4xd5:
    1. Domain d4xd5a_: 4xd5 A: [280095]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d4xd5g_: 4xd5 G: [280103]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  12. Domain(s) for 4xd6:
    1. Domain d4xd6a_: 4xd6 A: [280092]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    2. Domain d4xd6g_: 4xd6 G: [280091]
      automated match to d1jgma_
      complexed with cac, mpd, zn
  13. Domain(s) for 5w6b:
    1. Domain d5w6ba_: 5w6b A: [361277]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d5w6bg_: 5w6b G: [361244]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  14. Domain(s) for 5wcp:
    1. Domain d5wcpa_: 5wcp A: [362922]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    2. Domain d5wcpg_: 5wcp G: [362926]
      automated match to d1jgma_
      complexed with cac, mpd, zn
  15. Domain(s) for 5wcq:
    1. Domain d5wcqa_: 5wcq A: [354309]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d5wcqg_: 5wcq G: [354293]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  16. Domain(s) for 5wcr:
    1. Domain d5wcra_: 5wcr A: [362933]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    2. Domain d5wcrg_: 5wcr G: [362924]
      automated match to d1jgma_
      complexed with cac, mpd, zn
  17. Domain(s) for 5wcw:
    1. Domain d5wcwa_: 5wcw A: [362929]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d5wcwg_: 5wcw G: [362941]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  18. Domain(s) for 5wiz:
    1. Domain d5wiza_: 5wiz A: [362938]
      automated match to d1jgmb_
      complexed with cac, mpd, zn
    2. Domain d5wizg_: 5wiz G: [362939]
      automated match to d1jgmb_
      complexed with cac, mpd, zn
  19. Domain(s) for 5wj0:
    1. Domain d5wj0a_: 5wj0 A: [362935]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d5wj0g_: 5wj0 G: [362972]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  20. Domain(s) for 5wms:
    1. Domain d5wmsa_: 5wms A: [362957]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    2. Domain d5wmsg_: 5wms G: [362985]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    3. Domain d5wmsq_: 5wms Q: [362986]
      automated match to d1jgma_
      complexed with cac, mpd, zn
    4. Domain d5wmss_: 5wms S: [362950]
      automated match to d1jgma_
      complexed with cac, mpd, zn
  21. Domain(s) for 6aml:
    1. Domain d6amla_: 6aml A: [355688]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d6amlg_: 6aml G: [355886]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  22. Domain(s) for 6b2f:
    1. Domain d6b2fa_: 6b2f A: [362645]
      automated match to d1jgmb_
      complexed with hln, mpd, zn
    2. Domain d6b2fg_: 6b2f G: [362635]
      automated match to d1jgmb_
      complexed with hln, mpd, zn
  23. Domain(s) for 6bh7:
    1. Domain d6bh7a_: 6bh7 A: [362675]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d6bh7g_: 6bh7 G: [362748]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  24. Domain(s) for 6bhk:
    1. Domain d6bhka_: 6bhk A: [362678]
      automated match to d1qw7a_
      complexed with mpd, zn
    2. Domain d6bhkb_: 6bhk B: [362676]
      automated match to d1qw7a_
      complexed with mpd, zn
    3. Domain d6bhke_: 6bhk E: [362749]
      automated match to d1qw7a_
      complexed with mpd, zn
    4. Domain d6bhkg_: 6bhk G: [362636]
      automated match to d1qw7a_
      complexed with mpd, zn
  25. Domain(s) for 6bhl:
    1. Domain d6bhla_: 6bhl A: [362677]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. Domain d6bhlg_: 6bhl G: [362637]
      automated match to d1qw7a_
      complexed with cac, mpd, zn

More info for Species Brevundimonas diminuta [TaxId:293] from c.1.9.3 automated matches

Timeline for Species Brevundimonas diminuta [TaxId:293] from c.1.9.3 automated matches: