SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.72: Ribokinase-like [53612] (3 superfamilies)
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
potential superfamily: members of this fold have similar functions but different ATP-binding sites

Superfamily c.72.1: Ribokinase-like [53613] (6 families)
has extra strand located between strands 2 and 3
Family c.72.1.4: YjeF C-terminal domain-like [75292] (3 proteins)
automatically mapped to Pfam PF01256
Protein automated matches [193682] (1 species)
not a true protein

Species:

Bacillus subtilis [TaxId:1423] [193683] (9 PDB entries)
1. Domain for 3rph:
  - Domain d3rpha1: 3rph A:1-276 [193684]
    Other proteins in same PDB: d3rpha2
    automated match to d1kyha_
    complexed with amp, mg, po4
2. Domain for 3rpz:
  - Domain d3rpza1: 3rpz A:1-276 [215984]
    Other proteins in same PDB: d3rpza2
    automated match to d3rpha_
    complexed with amp, mg, npw
3. Domain for 3rq2:
  - Domain d3rq2a1: 3rq2 A:1-276 [215985]
    Other proteins in same PDB: d3rq2a2
    automated match to d3rpha_
    complexed with amp, mg, nax
4. Domain for 3rq5:
  - Domain d3rq5a_: 3rq5 A: [215986]
    automated match to d3rpha_
    complexed with coa, gol
5. Domain for 3rq6:
  - Domain d3rq6a1: 3rq6 A:1-276 [215987]
    Other proteins in same PDB: d3rq6a2
    automated match to d3rpha_
    complexed with apr, mg
6. Domain for 3rq8:
  - Domain d3rq8a1: 3rq8 A:1-276 [215988]
    Other proteins in same PDB: d3rq8a2
    automated match to d3rpha_
    complexed with ap5, mg
7. Domain for 3rqh:
  - Domain d3rqha1: 3rqh A:1-276 [215989]
    Other proteins in same PDB: d3rqha2
    automated match to d3rpha_
    complexed with b6p, mg
8. Domain for 3rqq:
  - Domain d3rqqa1: 3rqq A:1-276 [216001]
    Other proteins in same PDB: d3rqqa2
    automated match to d3rpha_
    complexed with ba3, mg
9. Domain for 3rqx:
  - Domain d3rqxa1: 3rqx A:1-276 [216004]
    Other proteins in same PDB: d3rqxa2
    automated match to d3rpha_
    complexed with b4p, cl, mg

More info for Protein automated matches from c.72.1.4: YjeF C-terminal domain-like

Timeline for Protein automated matches from c.72.1.4: YjeF C-terminal domain-like:

Protein automated matches from c.72.1.4: YjeF C-terminal domain-like first appeared in SCOPe 2.02
Protein automated matches from c.72.1.4: YjeF C-terminal domain-like appears in SCOPe 2.05
Protein automated matches from c.72.1.4: YjeF C-terminal domain-like appears in SCOPe 2.07
Protein automated matches from c.72.1.4: YjeF C-terminal domain-like appears in the current release, SCOPe 2.08