Lineage for Species: Pyrococcus abyssi [TaxId: 29292]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1920668Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 1920669Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. 1920670Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)
  6. 1920896Protein automated matches [193659] (5 species)
    not a true protein
  7. 1920918Species Pyrococcus abyssi [TaxId:29292] [193660] (6 PDB entries)

PDB entries in Species: Pyrococcus abyssi [TaxId: 29292]:

  1. Domain(s) for 3p8t:
    1. 1920919Domain d3p8ta_: 3p8t A: [214699]
      automated match to d3p8vb_
    2. 1920920Domain d3p8tb_: 3p8t B: [214700]
      automated match to d3p8vb_
  2. Domain(s) for 3p8v:
    1. 1920925Domain d3p8va_: 3p8v A: [200206]
      automated match to d3p8vb_
      complexed with asp
    2. 1920926Domain d3p8vb_: 3p8v B: [193661]
      automated match to d1nnha_
      complexed with asp
  3. Domain(s) for 3p8y:
    1. 1920923Domain d3p8ya_: 3p8y A: [214704]
      automated match to d3p8vb_
      complexed with asn
    2. 1920924Domain d3p8yb_: 3p8y B: [214705]
      automated match to d3p8vb_
      complexed with asn
  4. Domain(s) for 3reu:
    1. 1920927Domain d3reua_: 3reu A: [215780]
      automated match to d3p8vb_
      complexed with asp, atp, mg
    2. 1920928Domain d3reub_: 3reu B: [215781]
      automated match to d3p8vb_
      complexed with asp, atp, mg
  5. Domain(s) for 3rex:
    1. 1920921Domain d3rexa_: 3rex A: [215786]
      automated match to d3p8vb_
      complexed with amp, mg
    2. 1920922Domain d3rexb_: 3rex B: [215787]
      automated match to d3p8vb_
      complexed with amp, mg
  6. Domain(s) for 3rl6:
    1. 1920929Domain d3rl6a_: 3rl6 A: [215914]
      automated match to d3p8vb_
      complexed with amp, asn, mg
    2. 1920930Domain d3rl6b_: 3rl6 B: [215915]
      automated match to d3p8vb_
      complexed with amp, asn, mg

More info for Species Pyrococcus abyssi [TaxId:29292] from d.104.1.1 automated matches

Timeline for Species Pyrococcus abyssi [TaxId:29292] from d.104.1.1 automated matches: