Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1262429Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 1262430Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 1262431Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
    form octamers composed of two copies of each of the four histones
  6. 1262870Protein automated matches [193445] (4 species)
    not a true protein

Species:

  1. 1262871African clawed frog (Xenopus laevis) [TaxId:8355] [225181] (3 PDB entries)
    1. Domain for 2hue:
    2. Domains for 4eo5:
      1. 1262874Domain d4eo5b_: 4eo5 B: [201884]
        Other proteins in same PDB: d4eo5a_
        automated match to d2io5b_
        complexed with act, gol; mutant
      2. 1262875Domain d4eo5c_: 4eo5 C: [201885]
        Other proteins in same PDB: d4eo5a_
        automated match to d1s32f_
        complexed with act, gol; mutant
    3. Domain for 4kha:
  2. 1262876Fruit fly (Drosophila melanogaster) [TaxId:7227] [225310] (2 PDB entries)
    1. Domains for 2nqb:
      1. 1262877Domain d2nqbc_: 2nqb C: [198175]
        Other proteins in same PDB: d2nqba_, d2nqbb_, d2nqbe_, d2nqbf_
        automated match to d1id3c_
        protein/DNA complex
      2. 1262878Domain d2nqbg_: 2nqb G: [198176]
        Other proteins in same PDB: d2nqba_, d2nqbb_, d2nqbe_, d2nqbf_
        automated match to d1id3c_
        protein/DNA complex
    2. Domains for 2pyo:
      1. 1262879Domain d2pyoc_: 2pyo C: [198265]
        Other proteins in same PDB: d2pyoa_, d2pyob_, d2pyoe_, d2pyof_
        automated match to d3lelg_
        protein/DNA complex; complexed with cl, mn
      2. 1262880Domain d2pyog_: 2pyo G: [198266]
        Other proteins in same PDB: d2pyoa_, d2pyob_, d2pyoe_, d2pyof_
        automated match to d3lelg_
        protein/DNA complex; complexed with cl, mn
  3. 1262881Human (Homo sapiens) [TaxId:9606] [193446] (18 PDB entries)
    1. Domains for 3a6n:
      1. 1262900Domain d3a6nb_: 3a6n B: [231761]
        Other proteins in same PDB: d3a6na_, d3a6ne_
        automated match to d1kx3f_
        protein/DNA complex; complexed with cl, mn
      2. 1262901Domain d3a6nf_: 3a6n F: [231762]
        Other proteins in same PDB: d3a6na_, d3a6ne_
        automated match to d1kx3f_
        protein/DNA complex; complexed with cl, mn
    2. Domains for 3ayw:
      1. 1262904Domain d3aywa_: 3ayw A: [196168]
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262905Domain d3aywe_: 3ayw E: [198974]
        automated match to d3aywa_
        protein/DNA complex; complexed with cl, mn; mutant
    3. Domains for 3azf:
      1. 1262897Domain d3azfa_: 3azf A: [196167]
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262898Domain d3azfe_: 3azf E: [198989]
        automated match to d3azfa_
        protein/DNA complex; complexed with cl, mn; mutant
    4. Domains for 3azg:
      1. 1262892Domain d3azga_: 3azg A: [196166]
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262893Domain d3azge_: 3azg E: [198990]
        automated match to d3azga_
        protein/DNA complex; complexed with cl, mn; mutant
    5. Domains for 3azi:
      1. 1262902Domain d3azib_: 3azi B: [208485]
        Other proteins in same PDB: d3azia_, d3azie_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262903Domain d3azif_: 3azi F: [208487]
        Other proteins in same PDB: d3azia_, d3azie_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
    6. Domains for 3azj:
      1. 1262906Domain d3azja_: 3azj A: [193636]
        Other proteins in same PDB: d3azje_
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262907Domain d3azjb_: 3azj B: [198991]
        Other proteins in same PDB: d3azje_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
      3. 1262908Domain d3azjf_: 3azj F: [198993]
        Other proteins in same PDB: d3azje_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
    7. Domains for 3azl:
      1. 1262894Domain d3azlb_: 3azl B: [198995]
        Other proteins in same PDB: d3azla_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262895Domain d3azle_: 3azl E: [193637]
        Other proteins in same PDB: d3azla_
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      3. 1262896Domain d3azlf_: 3azl F: [198996]
        Other proteins in same PDB: d3azla_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
    8. Domains for 3azm:
      1. 1262909Domain d3azma_: 3azm A: [193638]
        Other proteins in same PDB: d3azme_
        automated match to d1kx5a_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 1262910Domain d3azmb_: 3azm B: [198997]
        Other proteins in same PDB: d3azme_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
      3. 1262911Domain d3azmf_: 3azm F: [198999]
        Other proteins in same PDB: d3azme_
        automated match to d1s32f_
        protein/DNA complex; complexed with cl, mn; mutant
    9. Domain for 3nqj:
    10. Domains for 3wkj:
      1. 1262912Domain d3wkjb_: 3wkj B: [238515]
        Other proteins in same PDB: d3wkja_, d3wkje_
        automated match to d3a6nb_
        protein/DNA complex; complexed with cl, mn
      2. 1262913Domain d3wkjf_: 3wkj F: [238516]
        Other proteins in same PDB: d3wkja_, d3wkje_
        automated match to d3a6nf_
        protein/DNA complex; complexed with cl, mn
    11. Domains for 4cay:
      1. 1262882Domain d4caya_: 4cay A: [236116]
        automated match to d1kx3c_
      2. 1262883Domain d4cayb_: 4cay B: [236115]
        automated match to d3mgrd_
    12. Domain for 4h9n:
    13. Domain for 4h9o:
    14. Domain for 4h9p:
    15. Domain for 4h9q:
    16. Domain for 4h9r:
    17. Domains for 4h9s:
      1. 1262890Domain d4h9sa_: 4h9s A: [193447]
        Other proteins in same PDB: d4h9sc_, d4h9sd_
        automated match to d1kx5a_
        protein/DNA complex; complexed with po4
      2. 1262891Domain d4h9sb_: 4h9s B: [202394]
        Other proteins in same PDB: d4h9sc_, d4h9sd_
        automated match to d4h9sa_
        protein/DNA complex; complexed with po4
    18. Domain for 4hga:
  4. 1262914Kluyveromyces lactis [TaxId:284590] [226140] (2 PDB entries)
    1. Domain for 2yfv:
    2. Domains for 2yfw:
      1. 1262916Domain d2yfwa_: 2yfw A: [207574]
        automated match to d2hioc_
      2. 1262917Domain d2yfwb_: 2yfw B: [207575]
        automated match to d1id3f_
      3. 1262918Domain d2yfwc_: 2yfw C: [207576]
        automated match to d2hioc_
      4. 1262919Domain d2yfwd_: 2yfw D: [207577]
        automated match to d1id3f_
      5. 1262920Domain d2yfwe_: 2yfw E: [207578]
        automated match to d2hioc_
      6. 1262921Domain d2yfwf_: 2yfw F: [207579]
        automated match to d1id3f_
      7. 1262922Domain d2yfwg_: 2yfw G: [207580]
        automated match to d2hioc_
      8. 1262923Domain d2yfwh_: 2yfw H: [207581]
        automated match to d1id3f_

More info for Protein automated matches from a.22.1.1: Nucleosome core histones

Timeline for Protein automated matches from a.22.1.1: Nucleosome core histones: