SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.3: Prealbumin-like [49451] (8 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold
Superfamily b.3.3: VHL [49468] (1 family)
automatically mapped to Pfam PF01847
Family b.3.3.1: VHL [49469] (2 proteins)
Protein automated matches [193392] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [193393] (7 PDB entries)

Domains for 3zrc:
1. Domain d3zrcc_: 3zrc C: [218406]
  Other proteins in same PDB: d3zrca_, d3zrcb_, d3zrcd_, d3zrce_, d3zrcg_, d3zrch_, d3zrcj_, d3zrck_
  automated match to d4awjf_
  complexed with l8b
2. Domain d3zrcf_: 3zrc F: [218409]
  Other proteins in same PDB: d3zrca_, d3zrcb_, d3zrcd_, d3zrce_, d3zrcg_, d3zrch_, d3zrcj_, d3zrck_
  automated match to d4awjf_
  complexed with l8b
3. Domain d3zrci_: 3zrc I: [218412]
  Other proteins in same PDB: d3zrca_, d3zrcb_, d3zrcd_, d3zrce_, d3zrcg_, d3zrch_, d3zrcj_, d3zrck_
  automated match to d4awjf_
  complexed with l8b
4. Domain d3zrcl_: 3zrc L: [218415]
  Other proteins in same PDB: d3zrca_, d3zrcb_, d3zrcd_, d3zrce_, d3zrcg_, d3zrch_, d3zrcj_, d3zrck_
  automated match to d4awjf_
  complexed with l8b
Domains for 3zrf:
1. Domain d3zrfc_: 3zrf C: [218418]
  Other proteins in same PDB: d3zrfa_, d3zrfb_, d3zrfd_, d3zrfe_, d3zrfg_, d3zrfh_, d3zrfj_, d3zrfk_
  automated match to d4awjf_
2. Domain d3zrff_: 3zrf F: [218421]
  Other proteins in same PDB: d3zrfa_, d3zrfb_, d3zrfd_, d3zrfe_, d3zrfg_, d3zrfh_, d3zrfj_, d3zrfk_
  automated match to d4awjf_
3. Domain d3zrfi_: 3zrf I: [218424]
  Other proteins in same PDB: d3zrfa_, d3zrfb_, d3zrfd_, d3zrfe_, d3zrfg_, d3zrfh_, d3zrfj_, d3zrfk_
  automated match to d4awjf_
4. Domain d3zrfl_: 3zrf L: [218427]
  Other proteins in same PDB: d3zrfa_, d3zrfb_, d3zrfd_, d3zrfe_, d3zrfg_, d3zrfh_, d3zrfj_, d3zrfk_
  automated match to d4awjf_
Domains for 3ztc:
1. Domain d3ztcc_: 3ztc C: [218460]
  Other proteins in same PDB: d3ztca_, d3ztcb_, d3ztcd_, d3ztce_, d3ztcg_, d3ztch_, d3ztcj_, d3ztck_
  automated match to d4awjf_
  complexed with tr0
2. Domain d3ztcf_: 3ztc F: [218463]
  Other proteins in same PDB: d3ztca_, d3ztcb_, d3ztcd_, d3ztce_, d3ztcg_, d3ztch_, d3ztcj_, d3ztck_
  automated match to d4awjf_
  complexed with tr0
3. Domain d3ztci_: 3ztc I: [218466]
  Other proteins in same PDB: d3ztca_, d3ztcb_, d3ztcd_, d3ztce_, d3ztcg_, d3ztch_, d3ztcj_, d3ztck_
  automated match to d4awjf_
  complexed with tr0
4. Domain d3ztcl_: 3ztc L: [218469]
  Other proteins in same PDB: d3ztca_, d3ztcb_, d3ztcd_, d3ztce_, d3ztcg_, d3ztch_, d3ztcj_, d3ztck_
  automated match to d4awjf_
  complexed with tr0
Domains for 3zun:
1. Domain d3zunc_: 3zun C: [218518]
  Other proteins in same PDB: d3zuna_, d3zunb_, d3zund_, d3zune_, d3zung_, d3zunh_, d3zunj_, d3zunk_
  automated match to d4awjf_
  complexed with gol, zun
2. Domain d3zunf_: 3zun F: [218521]
  Other proteins in same PDB: d3zuna_, d3zunb_, d3zund_, d3zune_, d3zung_, d3zunh_, d3zunj_, d3zunk_
  automated match to d4awjf_
  complexed with gol, zun
3. Domain d3zuni_: 3zun I: [218524]
  Other proteins in same PDB: d3zuna_, d3zunb_, d3zund_, d3zune_, d3zung_, d3zunh_, d3zunj_, d3zunk_
  automated match to d4awjf_
  complexed with gol, zun
4. Domain d3zunl_: 3zun L: [218527]
  Other proteins in same PDB: d3zuna_, d3zunb_, d3zund_, d3zune_, d3zung_, d3zunh_, d3zunj_, d3zunk_
  automated match to d4awjf_
  complexed with gol, zun
Domains for 4awj:
1. Domain d4awjc_: 4awj C: [201533]
  Other proteins in same PDB: d4awja_, d4awjb_, d4awjd_, d4awje_, d4awjg_, d4awjh_, d4awjj_, d4awjk1, d4awjk2
  automated match to d4awjf_
  complexed with act, acy, gol, v6f
2. Domain d4awjf_: 4awj F: [193394]
  Other proteins in same PDB: d4awja_, d4awjb_, d4awjd_, d4awje_, d4awjg_, d4awjh_, d4awjj_, d4awjk1, d4awjk2
  automated match to d1lm8v_
  complexed with act, acy, gol, v6f
3. Domain d4awji_: 4awj I: [201536]
  Other proteins in same PDB: d4awja_, d4awjb_, d4awjd_, d4awje_, d4awjg_, d4awjh_, d4awjj_, d4awjk1, d4awjk2
  automated match to d4awjf_
  complexed with act, acy, gol, v6f
4. Domain d4awjl_: 4awj L: [201539]
  Other proteins in same PDB: d4awja_, d4awjb_, d4awjd_, d4awje_, d4awjg_, d4awjh_, d4awjj_, d4awjk1, d4awjk2
  automated match to d4awjf_
  complexed with act, acy, gol, v6f

Domain for 4b95:

Domain d4b95i_: 4b95 I: [193439]
Other proteins in same PDB: d4b95a_, d4b95b1, d4b95b2, d4b95c_, d4b95d_, d4b95e1, d4b95e2, d4b95f_, d4b95g_, d4b95h1, d4b95h2, d4b95j_, d4b95k1, d4b95k2, d4b95l_
automated match to d1lm8v_
complexed with act, uck

Domains for 4b9k:
1. Domain d4b9kc_: 4b9k C: [201593]
  Other proteins in same PDB: d4b9ka_, d4b9kb1, d4b9kb2, d4b9kd_, d4b9ke_, d4b9kg_, d4b9kh_, d4b9kj_, d4b9kk1, d4b9kk2
  automated match to d4b9ki_
  complexed with act, tg0
2. Domain d4b9kf_: 4b9k F: [201596]
  Other proteins in same PDB: d4b9ka_, d4b9kb1, d4b9kb2, d4b9kd_, d4b9ke_, d4b9kg_, d4b9kh_, d4b9kj_, d4b9kk1, d4b9kk2
  automated match to d4b9ki_
  complexed with act, tg0
3. Domain d4b9ki_: 4b9k I: [194465]
  Other proteins in same PDB: d4b9ka_, d4b9kb1, d4b9kb2, d4b9kd_, d4b9ke_, d4b9kg_, d4b9kh_, d4b9kj_, d4b9kk1, d4b9kk2
  automated match to d1lm8v_
  complexed with act, tg0
4. Domain d4b9kl_: 4b9k L: [201601]
  Other proteins in same PDB: d4b9ka_, d4b9kb1, d4b9kb2, d4b9kd_, d4b9ke_, d4b9kg_, d4b9kh_, d4b9kj_, d4b9kk1, d4b9kk2
  automated match to d4b9ki_
  complexed with act, tg0

More info for Protein automated matches from b.3.3.1: VHL

Timeline for Protein automated matches from b.3.3.1: VHL:

Protein automated matches from b.3.3.1: VHL first appeared in SCOPe 2.02
Protein automated matches from b.3.3.1: VHL appears in SCOPe 2.07