Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1802176Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 1802177Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 1802178Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 proteins)
  6. 1802440Protein automated matches [193245] (15 species)
    not a true protein

Species:

  1. 1802441Human (Homo sapiens) [TaxId:9606] [228885] (2 PDB entries)
    1. Domain for 4nc5:
    2. Domain for 4ncs:
  2. 1802444Human parainfluenza 3 virus [TaxId:11217] [228816] (2 PDB entries)
    1. Domains for 4mza:
      1. 1802445Domain d4mzaa_: 4mza A: [235707]
        automated match to d4mzab_
        complexed with ca, edo, nag, po4, so4
      2. 1802446Domain d4mzab_: 4mza B: [228817]
        automated match to d1v3ea_
        complexed with ca, edo, nag, po4, so4
    2. Domains for 4mze:
      1. 1802447Domain d4mzea_: 4mze A: [235708]
        automated match to d4mzeb_
        complexed with ca, edo, nag, peg, po4, so4; mutant
      2. 1802448Domain d4mzeb_: 4mze B: [228824]
        automated match to d1v3ea_
        complexed with ca, edo, nag, peg, po4, so4; mutant
  3. 1802449Human parainfluenza virus 3 [TaxId:11216] [270133] (3 PDB entries)
    1. Domains for 4wef:
      1. 1802452Domain d4wefa_: 4wef A: [276999]
        automated match to d4mzab_
        complexed with bma, ca, df4, fsi, fuc, nag, sfj, so4
      2. 1802453Domain d4wefb_: 4wef B: [276998]
        automated match to d4mzab_
        complexed with bma, ca, df4, fsi, fuc, nag, sfj, so4
    2. Domains for 4xjq:
      1. 1802450Domain d4xjqa_: 4xjq A: [270134]
        automated match to d4mzab_
        complexed with bma, ca, edo, gol, man, nag, so4
      2. 1802451Domain d4xjqb_: 4xjq B: [270147]
        automated match to d4mzab_
        complexed with bma, ca, edo, gol, man, nag, so4
    3. Domains for 4xjr:
      1. 1802454Domain d4xjra_: 4xjr A: [270136]
        automated match to d4mzab_
        complexed with ca, edo, nag, oel, so4
      2. 1802455Domain d4xjrb_: 4xjr B: [270135]
        automated match to d4mzab_
        complexed with ca, edo, nag, oel, so4
  4. 1802456Influenza a virus (a/chicken/nanchang/7-010/2000(h3n6)) [TaxId:215864] [258472] (2 PDB entries)
    1. Domains for 4qn4:
      1. 1802457Domain d4qn4a_: 4qn4 A: [258804]
        automated match to d1v0za_
        complexed with ca, gol, mpd
      2. 1802458Domain d4qn4b_: 4qn4 B: [258802]
        automated match to d1v0za_
        complexed with ca, gol, mpd
    2. Domains for 4qn6:
      1. 1802459Domain d4qn6a_: 4qn6 A: [258473]
        automated match to d1v0za_
        complexed with ca, lnv
      2. 1802460Domain d4qn6b_: 4qn6 B: [258474]
        automated match to d1v0za_
        complexed with ca, lnv
  5. 1802461Influenza a virus (a/mallard/alb/196/1996(h10n7)) [TaxId:352589] [258467] (2 PDB entries)
    1. Domains for 4qn3:
      1. 1802462Domain d4qn3a_: 4qn3 A: [258475]
        automated match to d4mwua_
        complexed with ca, nag
      2. 1802463Domain d4qn3b_: 4qn3 B: [258476]
        automated match to d4mwua_
        complexed with ca, nag
    2. Domains for 4qn7:
      1. 1802464Domain d4qn7a_: 4qn7 A: [258468]
        automated match to d4mwua_
        complexed with ca, g39, nag
      2. 1802465Domain d4qn7b_: 4qn7 B: [258471]
        automated match to d4mwua_
        complexed with ca, g39, nag
  6. 1802466Influenza A virus [TaxId:11320] [255029] (1 PDB entry)
  7. 1802468Influenza a virus [TaxId:119210] [193455] (7 PDB entries)
    1. Domain for 4gzo:
    2. Domain for 4gzp:
    3. Domain for 4gzq:
    4. Domains for 4gzs:
      1. 1802479Domain d4gzsa_: 4gzs A: [222284]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      2. 1802480Domain d4gzsb_: 4gzs B: [222285]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      3. 1802481Domain d4gzsc_: 4gzs C: [222286]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      4. 1802482Domain d4gzsd_: 4gzs D: [222287]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
    5. Domains for 4gzt:
      1. 1802469Domain d4gzta_: 4gzt A: [222288]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      2. 1802470Domain d4gztb_: 4gzt B: [222289]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      3. 1802471Domain d4gztc_: 4gzt C: [222290]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      4. 1802472Domain d4gztd_: 4gzt D: [222291]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
    6. Domains for 4gzw:
      1. 1802474Domain d4gzwa_: 4gzw A: [222292]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      2. 1802475Domain d4gzwb_: 4gzw B: [222293]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      3. 1802476Domain d4gzwc_: 4gzw C: [222294]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      4. 1802477Domain d4gzwd_: 4gzw D: [222295]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
    7. Domains for 4gzx:
      1. 1802483Domain d4gzxa_: 4gzx A: [193457]
        automated match to d1ivga_
        complexed with ca, nag, sia; mutant
      2. 1802484Domain d4gzxb_: 4gzx B: [202319]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      3. 1802485Domain d4gzxc_: 4gzx C: [202320]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      4. 1802486Domain d4gzxd_: 4gzx D: [202321]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
  8. 1802488Influenza a virus [TaxId:1329890] [229135] (5 PDB entries)
    1. Domain for 4mwj:
    2. Domain for 4mwq:
    3. Domain for 4mwr:
    4. Domain for 4mwu:
    5. Domain for 4mwv:
  9. 1802494Influenza a virus [TaxId:1331849] [229137] (5 PDB entries)
    1. Domain for 4mwl:
    2. Domain for 4mww:
    3. Domain for 4mwx:
    4. Domain for 4mwy:
    5. Domain for 4mx0:
  10. 1802500Influenza a virus [TaxId:382827] [193246] (9 PDB entries)
    1. Domains for 3tia:
      1. 1802511Domain d3tiaa_: 3tia A: [249879]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      2. 1802512Domain d3tiab_: 3tia B: [249880]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      3. 1802513Domain d3tiac_: 3tia C: [249881]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      4. 1802514Domain d3tiad_: 3tia D: [249882]
        automated match to d1ivga_
        complexed with ca, lnv, nag
    2. Domains for 3tib:
      1. 1802521Domain d3tiba_: 3tib A: [249883]
        automated match to d1ivga_
        complexed with ca, lvo
      2. 1802522Domain d3tibb_: 3tib B: [249884]
        automated match to d1ivga_
        complexed with ca, lvo
      3. 1802523Domain d3tibc_: 3tib C: [249885]
        automated match to d1ivga_
        complexed with ca, lvo
      4. 1802524Domain d3tibd_: 3tib D: [249886]
        automated match to d1ivga_
        complexed with ca, lvo
    3. Domains for 3tic:
      1. 1802517Domain d3tica_: 3tic A: [249887]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      2. 1802518Domain d3ticb_: 3tic B: [249888]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      3. 1802519Domain d3ticc_: 3tic C: [249889]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      4. 1802520Domain d3ticd_: 3tic D: [249890]
        automated match to d1ivga_
        complexed with ca, nag, zmr
    4. Domains for 4h52:
      1. 1802509Domain d4h52a_: 4h52 A: [193247]
        automated match to d1ivga_
        complexed with ca, fsi
      2. 1802510Domain d4h52b_: 4h52 B: [202366]
        automated match to d4h52a_
        complexed with ca, fsi
    5. Domains for 4h53:
      1. 1802501Domain d4h53a_: 4h53 A: [193984]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      2. 1802502Domain d4h53b_: 4h53 B: [193986]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      3. 1802503Domain d4h53c_: 4h53 C: [193983]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      4. 1802504Domain d4h53d_: 4h53 D: [193985]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
    6. Domains for 4k1h:
      1. 1802515Domain d4k1ha_: 4k1h A: [197263]
        automated match to d1ivga_
        complexed with ca
      2. 1802516Domain d4k1hb_: 4k1h B: [202821]
        automated match to d4h52a_
        complexed with ca
    7. Domains for 4k1i:
      1. 1802507Domain d4k1ia_: 4k1i A: [224101]
        automated match to d4h52a_
        complexed with ca, g39, nag
      2. 1802508Domain d4k1ib_: 4k1i B: [224102]
        automated match to d4h52a_
        complexed with ca, g39, nag
    8. Domains for 4k1j:
      1. 1802525Domain d4k1ja_: 4k1j A: [197264]
        automated match to d1ivga_
        complexed with ca, g39
      2. 1802526Domain d4k1jb_: 4k1j B: [202822]
        automated match to d4k1ja_
        complexed with ca, g39
    9. Domains for 4k1k:
      1. 1802505Domain d4k1ka_: 4k1k A: [197261]
        automated match to d1ivga_
        complexed with ca, g39
      2. 1802506Domain d4k1kb_: 4k1k B: [197262]
        automated match to d1ivga_
        complexed with ca, g39
  11. 1802527Influenza b virus (b/brisbane/60/2008) [TaxId:604436] [256640] (3 PDB entries)
    1. Domains for 4cpl:
      1. 1802528Domain d4cpla_: 4cpl A: [256641]
        automated match to d1infa_
        complexed with ca, nag
      2. 1802529Domain d4cplb_: 4cpl B: [262609]
        automated match to d1infa_
        complexed with ca, nag
    2. Domains for 4cpm:
      1. 1802532Domain d4cpma_: 4cpm A: [266016]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
      2. 1802533Domain d4cpmb_: 4cpm B: [266017]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
    3. Domains for 4cpn:
      1. 1802530Domain d4cpna_: 4cpn A: [262610]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      2. 1802531Domain d4cpnb_: 4cpn B: [260159]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
  12. 1802534Influenza B virus [TaxId:11520] [256642] (3 PDB entries)
    1. Domains for 4cpo:
      1. 1802537Domain d4cpoa_: 4cpo A: [260160]
        automated match to d1infa_
        complexed with ca, edo, nag
      2. 1802538Domain d4cpob_: 4cpo B: [256643]
        automated match to d1infa_
        complexed with ca, edo, nag
    2. Domains for 4cpy:
      1. 1802535Domain d4cpya_: 4cpy A: [266018]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
      2. 1802536Domain d4cpyb_: 4cpy B: [266019]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
    3. Domains for 4cpz:
      1. 1802539Domain d4cpza_: 4cpz A: [266020]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      2. 1802540Domain d4cpzb_: 4cpz B: [266021]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      3. 1802541Domain d4cpzc_: 4cpz C: [266022]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      4. 1802542Domain d4cpzd_: 4cpz D: [266023]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      5. 1802543Domain d4cpze_: 4cpz E: [266024]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      6. 1802544Domain d4cpzf_: 4cpz F: [266025]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      7. 1802545Domain d4cpzg_: 4cpz G: [266026]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      8. 1802546Domain d4cpzh_: 4cpz H: [266027]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
  13. 1802547Micromonospora viridifaciens [TaxId:1881] [254941] (3 PDB entries)
    1. Domains for 1wcq:
      1. 1802552Domain d1wcqa3: 1wcq A:47-402 [120896]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
      2. 1802553Domain d1wcqb3: 1wcq B:47-402 [120899]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
      3. 1802554Domain d1wcqc3: 1wcq C:49-402 [120902]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
    2. Domain for 2ber:
    3. Domains for 2bzd:
      1. 1802549Domain d2bzda1: 2bzd A:47-402 [241386]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
      2. 1802550Domain d2bzdb1: 2bzd B:47-402 [241389]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
      3. 1802551Domain d2bzdc1: 2bzd C:48-402 [241392]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
  14. 1802555Trypanosoma cruzi [TaxId:5693] [226151] (1 PDB entry)
  15. 1802557Trypanosoma rangeli [TaxId:5698] [255026] (3 PDB entries)
    1. Domain for 2a75:
    2. Domain for 2ags:
    3. Domain for 2fhr:

More info for Protein automated matches from b.68.1.1: Sialidases (neuraminidases)

Timeline for Protein automated matches from b.68.1.1: Sialidases (neuraminidases):