Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2398193Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 2398194Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 2398195Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 protein domains)
  6. 2398492Protein automated matches [193245] (14 species)
    not a true protein

Species:

  1. 2398493Human (Homo sapiens) [TaxId:9606] [228885] (2 PDB entries)
    1. Domain for 4nc5:
    2. Domain for 4ncs:
  2. 2398496Human parainfluenza 3 virus [TaxId:11217] [228816] (2 PDB entries)
    1. Domains for 4mza:
      1. 2398497Domain d4mzaa_: 4mza A: [235707]
        automated match to d4mzab_
        complexed with bma, ca, edo, ful, man, nag, po4, so4
      2. 2398498Domain d4mzab_: 4mza B: [228817]
        automated match to d1v3ea_
        complexed with bma, ca, edo, ful, man, nag, po4, so4
    2. Domains for 4mze:
      1. 2398499Domain d4mzea_: 4mze A: [235708]
        automated match to d4mzeb_
        complexed with bma, ca, edo, ful, man, nag, peg, po4, so4; mutant
      2. 2398500Domain d4mzeb_: 4mze B: [228824]
        automated match to d1v3ea_
        complexed with bma, ca, edo, ful, man, nag, peg, po4, so4; mutant
  3. 2398501Human parainfluenza virus 3 [TaxId:11216] [270133] (5 PDB entries)
    1. Domains for 4wef:
      1. 2398507Domain d4wefa_: 4wef A: [276999]
        automated match to d4mzab_
        complexed with bma, ca, df4, fsi, fuc, nag, sfj, so4
      2. 2398508Domain d4wefb_: 4wef B: [276998]
        automated match to d4mzab_
        complexed with bma, ca, df4, fsi, fuc, nag, sfj, so4
    2. Domains for 4xjq:
      1. 2398502Domain d4xjqa_: 4xjq A: [270134]
        automated match to d4mzab_
        complexed with bma, ca, edo, gol, man, nag, so4
      2. 2398503Domain d4xjqb_: 4xjq B: [270147]
        automated match to d4mzab_
        complexed with bma, ca, edo, gol, man, nag, so4
    3. Domains for 4xjr:
      1. 2398509Domain d4xjra_: 4xjr A: [270136]
        automated match to d4mzab_
        complexed with bma, ca, edo, nag, oel, so4
      2. 2398510Domain d4xjrb_: 4xjr B: [270135]
        automated match to d4mzab_
        complexed with bma, ca, edo, nag, oel, so4
    4. Domains for 5kv8:
      1. 2398504Domain d5kv8a_: 5kv8 A: [336581]
        automated match to d4xjqa_
        complexed with 6y6, bma, ca, cit, edo, gol, man, nag, so4
      2. 2398505Domain d5kv8b_: 5kv8 B: [336572]
        automated match to d4xjqa_
        complexed with 6y6, bma, ca, cit, edo, gol, man, nag, so4
    5. Domain for 5kv9:
  4. 2398511Influenza A virus (a/chicken/sichuan/ncjpl1/2014(h5n6)) [TaxId:1529593] [315491] (1 PDB entry)
  5. 2398516Influenza A virus [TaxId:119210] [193455] (7 PDB entries)
    1. Domain for 4gzo:
    2. Domain for 4gzp:
    3. Domain for 4gzq:
    4. Domains for 4gzs:
      1. 2398527Domain d4gzsa_: 4gzs A: [222284]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      2. 2398528Domain d4gzsb_: 4gzs B: [222285]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      3. 2398529Domain d4gzsc_: 4gzs C: [222286]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
      4. 2398530Domain d4gzsd_: 4gzs D: [222287]
        automated match to d4gzxa_
        complexed with ca, epe, nag; mutant
    5. Domains for 4gzt:
      1. 2398517Domain d4gzta_: 4gzt A: [222288]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      2. 2398518Domain d4gztb_: 4gzt B: [222289]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      3. 2398519Domain d4gztc_: 4gzt C: [222290]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
      4. 2398520Domain d4gztd_: 4gzt D: [222291]
        automated match to d4gzxa_
        complexed with ca, g39, nag; mutant
    6. Domains for 4gzw:
      1. 2398522Domain d4gzwa_: 4gzw A: [222292]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      2. 2398523Domain d4gzwb_: 4gzw B: [222293]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      3. 2398524Domain d4gzwc_: 4gzw C: [222294]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      4. 2398525Domain d4gzwd_: 4gzw D: [222295]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
    7. Domains for 4gzx:
      1. 2398531Domain d4gzxa_: 4gzx A: [193457]
        automated match to d1ivga_
        complexed with ca, nag, sia; mutant
      2. 2398532Domain d4gzxb_: 4gzx B: [202319]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      3. 2398533Domain d4gzxc_: 4gzx C: [202320]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
      4. 2398534Domain d4gzxd_: 4gzx D: [202321]
        automated match to d4gzxa_
        complexed with ca, nag, sia; mutant
  6. 2398536Influenza A virus [TaxId:382827] [193246] (9 PDB entries)
    1. Domains for 3tia:
      1. 2398547Domain d3tiaa_: 3tia A: [249879]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      2. 2398548Domain d3tiab_: 3tia B: [249880]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      3. 2398549Domain d3tiac_: 3tia C: [249881]
        automated match to d1ivga_
        complexed with ca, lnv, nag
      4. 2398550Domain d3tiad_: 3tia D: [249882]
        automated match to d1ivga_
        complexed with ca, lnv, nag
    2. Domains for 3tib:
      1. 2398557Domain d3tiba_: 3tib A: [249883]
        automated match to d1ivga_
        complexed with ca, lvo
      2. 2398558Domain d3tibb_: 3tib B: [249884]
        automated match to d1ivga_
        complexed with ca, lvo
      3. 2398559Domain d3tibc_: 3tib C: [249885]
        automated match to d1ivga_
        complexed with ca, lvo
      4. 2398560Domain d3tibd_: 3tib D: [249886]
        automated match to d1ivga_
        complexed with ca, lvo
    3. Domains for 3tic:
      1. 2398553Domain d3tica_: 3tic A: [249887]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      2. 2398554Domain d3ticb_: 3tic B: [249888]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      3. 2398555Domain d3ticc_: 3tic C: [249889]
        automated match to d1ivga_
        complexed with ca, nag, zmr
      4. 2398556Domain d3ticd_: 3tic D: [249890]
        automated match to d1ivga_
        complexed with ca, nag, zmr
    4. Domains for 4h52:
      1. 2398545Domain d4h52a_: 4h52 A: [193247]
        automated match to d1ivga_
        complexed with ca, fsi
      2. 2398546Domain d4h52b_: 4h52 B: [202366]
        automated match to d4h52a_
        complexed with ca, fsi
    5. Domains for 4h53:
      1. 2398537Domain d4h53a_: 4h53 A: [193984]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      2. 2398538Domain d4h53b_: 4h53 B: [193986]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      3. 2398539Domain d4h53c_: 4h53 C: [193983]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
      4. 2398540Domain d4h53d_: 4h53 D: [193985]
        automated match to d1ivga_
        complexed with ca, gol, nag, slb
    6. Domains for 4k1h:
      1. 2398551Domain d4k1ha_: 4k1h A: [197263]
        automated match to d1ivga_
        complexed with ca
      2. 2398552Domain d4k1hb_: 4k1h B: [202821]
        automated match to d4h52a_
        complexed with ca
    7. Domains for 4k1i:
      1. 2398543Domain d4k1ia_: 4k1i A: [224101]
        automated match to d4h52a_
        complexed with ca, g39, nag
      2. 2398544Domain d4k1ib_: 4k1i B: [224102]
        automated match to d4h52a_
        complexed with ca, g39, nag
    8. Domains for 4k1j:
      1. 2398561Domain d4k1ja_: 4k1j A: [197264]
        automated match to d1ivga_
        complexed with ca, g39
      2. 2398562Domain d4k1jb_: 4k1j B: [202822]
        automated match to d4k1ja_
        complexed with ca, g39
    9. Domains for 4k1k:
      1. 2398541Domain d4k1ka_: 4k1k A: [197261]
        automated match to d1ivga_
        complexed with ca, g39
      2. 2398542Domain d4k1kb_: 4k1k B: [197262]
        automated match to d1ivga_
        complexed with ca, g39
  7. 2398563Influenza A virus, different strains [TaxId:11320] [255029] (1 PDB entry)
  8. 2398565Influenza B virus (b/brisbane/60/2008) [TaxId:604436] [256640] (3 PDB entries)
    1. Domains for 4cpl:
      1. 2398566Domain d4cpla_: 4cpl A: [256641]
        automated match to d1infa_
        complexed with ca, nag
      2. 2398567Domain d4cplb_: 4cpl B: [262609]
        automated match to d1infa_
        complexed with ca, nag
    2. Domains for 4cpm:
      1. 2398570Domain d4cpma_: 4cpm A: [266016]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
      2. 2398571Domain d4cpmb_: 4cpm B: [266017]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
    3. Domains for 4cpn:
      1. 2398568Domain d4cpna_: 4cpn A: [262610]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      2. 2398569Domain d4cpnb_: 4cpn B: [260159]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
  9. 2398572Influenza B virus [TaxId:11520] [256642] (3 PDB entries)
    1. Domains for 4cpo:
      1. 2398575Domain d4cpoa_: 4cpo A: [260160]
        automated match to d1infa_
        complexed with ca, edo, nag
      2. 2398576Domain d4cpob_: 4cpo B: [256643]
        automated match to d1infa_
        complexed with ca, edo, nag
    2. Domains for 4cpy:
      1. 2398573Domain d4cpya_: 4cpy A: [266018]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
      2. 2398574Domain d4cpyb_: 4cpy B: [266019]
        automated match to d1infa_
        complexed with ca, edo, g39, nag
    3. Domains for 4cpz:
      1. 2398577Domain d4cpza_: 4cpz A: [266020]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      2. 2398578Domain d4cpzb_: 4cpz B: [266021]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      3. 2398579Domain d4cpzc_: 4cpz C: [266022]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      4. 2398580Domain d4cpzd_: 4cpz D: [266023]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      5. 2398581Domain d4cpze_: 4cpz E: [266024]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      6. 2398582Domain d4cpzf_: 4cpz F: [266025]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      7. 2398583Domain d4cpzg_: 4cpz G: [266026]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
      8. 2398584Domain d4cpzh_: 4cpz H: [266027]
        automated match to d1infa_
        complexed with ca, edo, nag, zmr
  10. 2398585Micromonospora viridifaciens [TaxId:1881] [254941] (4 PDB entries)
    1. Domains for 1wcq:
      1. 2398593Domain d1wcqa3: 1wcq A:47-402 [120896]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
      2. 2398594Domain d1wcqb3: 1wcq B:47-402 [120899]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
      3. 2398595Domain d1wcqc3: 1wcq C:49-402 [120902]
        Other proteins in same PDB: d1wcqa1, d1wcqa2, d1wcqb1, d1wcqb2, d1wcqc1, d1wcqc2
        automated match to d1euta3
        complexed with dan, gol, na
    2. Domain for 2ber:
    3. Domains for 2bq9:
      1. 2398587Domain d2bq9a1: 2bq9 A:47-402 [303605]
        Other proteins in same PDB: d2bq9a2, d2bq9a3, d2bq9b2, d2bq9b3, d2bq9c2, d2bq9c3
        automated match to d1euta3
        complexed with gal, gol, na
      2. 2398588Domain d2bq9b1: 2bq9 B:47-402 [303608]
        Other proteins in same PDB: d2bq9a2, d2bq9a3, d2bq9b2, d2bq9b3, d2bq9c2, d2bq9c3
        automated match to d1euta3
        complexed with gal, gol, na
      3. 2398589Domain d2bq9c1: 2bq9 C:48-402 [303611]
        Other proteins in same PDB: d2bq9a2, d2bq9a3, d2bq9b2, d2bq9b3, d2bq9c2, d2bq9c3
        automated match to d1euta3
        complexed with gal, gol, na
    4. Domains for 2bzd:
      1. 2398590Domain d2bzda1: 2bzd A:47-402 [241386]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
      2. 2398591Domain d2bzdb1: 2bzd B:47-402 [241389]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
      3. 2398592Domain d2bzdc1: 2bzd C:48-402 [241392]
        Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
        automated match to d1euta3
        complexed with gal, gol, na
  11. 2398596Mumps virus [TaxId:11161] [323195] (2 PDB entries)
    1. Domains for 5b2c:
      1. 2398599Domain d5b2ca_: 5b2c A: [323196]
        automated match to d1e8ub_
        complexed with nag, so4
      2. 2398600Domain d5b2cb_: 5b2c B: [323246]
        automated match to d1e8ub_
        complexed with nag, so4
    2. Domains for 5b2d:
      1. 2398597Domain d5b2da_: 5b2d A: [323283]
        automated match to d1e8ub_
        complexed with nag, slt, so4
      2. 2398598Domain d5b2db_: 5b2d B: [323237]
        automated match to d1e8ub_
        complexed with nag, slt, so4
  12. 2398601Simian virus 5 [TaxId:11207] [346257] (6 PDB entries)
    1. Domain for 1z4v:
    2. Domain for 1z4w:
    3. Domain for 1z4x:
    4. Domain for 1z4y:
    5. Domain for 1z4z:
    6. Domain for 1z50:
  13. 2398608Trypanosoma cruzi [TaxId:5693] [226151] (1 PDB entry)
  14. 2398610Trypanosoma rangeli [TaxId:5698] [255026] (3 PDB entries)
    1. Domain for 2a75:
    2. Domain for 2ags:
    3. Domain for 2fhr:

More info for Protein automated matches from b.68.1.1: Sialidases (neuraminidases)

Timeline for Protein automated matches from b.68.1.1: Sialidases (neuraminidases):