Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1727563Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1730421Superfamily a.25.3: EsxAB dimer-like [140453] (2 families) (S)
    (hetero)dimer of alpha-hairpin subunits similar to that of the half-ferritin family; no bound metals
  5. 1730435Family a.25.3.0: automated matches [193224] (1 protein)
    not a true family
  6. 1730436Protein automated matches [193225] (4 species)
    not a true protein

Species:

  1. 1730437Bacillus anthracis [TaxId:260799] [193226] (8 PDB entries)
    1. Domains for 4iyh:
      1. 1730458Domain d4iyha_: 4iyh A: [202680]
        automated match to d4iyhd_
        complexed with act, edo, fmt, so4
      2. 1730459Domain d4iyhb_: 4iyh B: [202681]
        automated match to d4iyhd_
        complexed with act, edo, fmt, so4
      3. 1730460Domain d4iyhc_: 4iyh C: [202682]
        automated match to d4iyhd_
        complexed with act, edo, fmt, so4
      4. 1730461Domain d4iyhd_: 4iyh D: [193243]
        automated match to d3favc_
        complexed with act, edo, fmt, so4
    2. Domains for 4iyi:
      1. 1730462Domain d4iyia_: 4iyi A: [223475]
        automated match to d4iyhd_
        complexed with act, edo, so4
      2. 1730463Domain d4iyib_: 4iyi B: [223476]
        automated match to d4iyhd_
        complexed with act, edo, so4
      3. 1730464Domain d4iyic_: 4iyi C: [223477]
        automated match to d4iyhd_
        complexed with act, edo, so4
      4. 1730465Domain d4iyid_: 4iyi D: [223478]
        automated match to d4iyhd_
        complexed with act, edo, so4
    3. Domains for 4j10:
      1. 1730444Domain d4j10a_: 4j10 A: [194004]
        automated match to d3favc_
        complexed with fmt
      2. 1730445Domain d4j10b_: 4j10 B: [194005]
        automated match to d3favc_
        complexed with fmt
    4. Domains for 4j11:
      1. 1730440Domain d4j11a_: 4j11 A: [194002]
        automated match to d3favc_
      2. 1730441Domain d4j11b_: 4j11 B: [194003]
        automated match to d3favc_
      3. 1730442Domain d4j11c_: 4j11 C: [194006]
        automated match to d3favc_
      4. 1730443Domain d4j11d_: 4j11 D: [194001]
        automated match to d3favc_
    5. Domains for 4j41:
      1. 1730448Domain d4j41a_: 4j41 A: [202688]
        automated match to d4j41d_
        complexed with act, fmt, peg; mutant
      2. 1730449Domain d4j41b_: 4j41 B: [202689]
        automated match to d4j41d_
        complexed with act, fmt, peg; mutant
      3. 1730450Domain d4j41c_: 4j41 C: [202690]
        automated match to d4j41d_
        complexed with act, fmt, peg; mutant
      4. 1730451Domain d4j41d_: 4j41 D: [193242]
        automated match to d3favc_
        complexed with act, fmt, peg; mutant
      5. 1730452Domain d4j41e_: 4j41 E: [202691]
        automated match to d4j41d_
        complexed with act, fmt, peg; mutant
      6. 1730453Domain d4j41f_: 4j41 F: [202692]
        automated match to d4j41d_
        complexed with act, fmt, peg; mutant
    6. Domains for 4j42:
      1. 1730438Domain d4j42a_: 4j42 A: [193970]
        automated match to d3favc_
        complexed with flc, fmt; mutant
      2. 1730439Domain d4j42b_: 4j42 B: [202693]
        automated match to d4j42a_
        complexed with flc, fmt; mutant
    7. Domains for 4j7j:
      1. 1730446Domain d4j7ja1: 4j7j A:1-86 [202718]
        automated match to d4j7jb_
        complexed with gol; mutant
      2. 1730447Domain d4j7jb_: 4j7j B: [193228]
        automated match to d3favc_
        complexed with gol; mutant
    8. Domains for 4j7k:
      1. 1730454Domain d4j7ka_: 4j7k A: [202719]
        automated match to d4j7kd_
        mutant
      2. 1730455Domain d4j7kb_: 4j7k B: [202720]
        automated match to d4j7kd_
        mutant
      3. 1730456Domain d4j7kc_: 4j7k C: [202721]
        automated match to d4j7kd_
        mutant
      4. 1730457Domain d4j7kd_: 4j7k D: [193227]
        automated match to d3favc_
        mutant
  2. 1730466Staphylococcus aureus [TaxId:1280] [255623] (2 PDB entries)
    1. Domains for 2vrz:
      1. 1730469Domain d2vrza_: 2vrz A: [243931]
        automated match to d3gvmc_
        complexed with zn
      2. 1730470Domain d2vrzb_: 2vrz B: [243932]
        automated match to d3gvmc_
        complexed with zn
    2. Domains for 2vs0:
      1. 1730467Domain d2vs0a_: 2vs0 A: [243933]
        automated match to d3gvmc_
        complexed with cac, zn
      2. 1730468Domain d2vs0b_: 2vs0 B: [243934]
        automated match to d3gvmc_
        complexed with cac, zn
  3. 1730471Streptococcus agalactiae [TaxId:208435] [232336] (2 PDB entries)
    1. Domains for 3gvm:
      1. 1730474Domain d3gvma_: 3gvm A: [232337]
        automated match to d4j7kb_
      2. 1730475Domain d3gvmb_: 3gvm B: [232338]
        automated match to d4j7kb_
      3. 1730476Domain d3gvmc_: 3gvm C: [232339]
        automated match to d4j7kb_
      4. 1730477Domain d3gvmd_: 3gvm D: [232340]
        automated match to d4j7kb_
    2. Domains for 3gwk:
      1. 1730472Domain d3gwkc_: 3gwk C: [246376]
        automated match to d3gvmc_
        complexed with so4
      2. 1730473Domain d3gwke_: 3gwk E: [246377]
        automated match to d3gvmc_
        complexed with so4
  4. 1730478Streptococcus agalactiae [TaxId:211110] [233061] (1 PDB entry)

More info for Protein automated matches from a.25.3.0: automated matches

Timeline for Protein automated matches from a.25.3.0: automated matches: