Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1837328Fold c.18: Uracil-DNA glycosylase-like [52140] (1 superfamily)
    3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 2134
  4. 1837329Superfamily c.18.1: Uracil-DNA glycosylase-like [52141] (5 families) (S)
  5. 1837432Family c.18.1.0: automated matches [193165] (1 protein)
    not a true family
  6. 1837433Protein automated matches [193166] (6 species)
    not a true protein

Species:

  1. 1837434Bacillus subtilis [TaxId:224308] [193167] (2 PDB entries)
    1. Domain for 3zoq:
    2. Domain for 3zor:
  2. 1837437Deinococcus radiodurans [TaxId:243230] [224999] (1 PDB entry)
  3. 1837439Leishmania naiffi [TaxId:5678] [255787] (1 PDB entry)
  4. 1837441Mycobacterium tuberculosis [TaxId:83332] [231763] (19 PDB entries)
    1. Domains for 2zhx:
      1. 1837460Domain d2zhxa_: 2zhx A: [239057]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      2. 1837461Domain d2zhxc_: 2zhx C: [239058]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      3. 1837462Domain d2zhxe_: 2zhx E: [239059]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      4. 1837463Domain d2zhxg_: 2zhx G: [239060]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      5. 1837464Domain d2zhxi_: 2zhx I: [239061]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      6. 1837465Domain d2zhxk_: 2zhx K: [239062]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      7. 1837466Domain d2zhxm_: 2zhx M: [239063]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
    2. Domain for 3a7n:
    3. Domain for 4wpk:
    4. Domain for 4wpl:
      • 1837445Domain d4wpla_: 4wpl A: [274979]
        automated match to d3a7na_
        protein/DNA complex; complexed with act, cl, dms, gol, ura
    5. Domain for 4wru:
    6. Domain for 4wrv:
    7. Domain for 4wrw:
    8. Domain for 4wrx:
    9. Domain for 4wry:
    10. Domain for 4wrz:
      • 1837447Domain d4wrza_: 4wrz A: [274988]
        automated match to d3a7na_
        protein/DNA complex; complexed with cit, cl, ipa, urf
    11. Domain for 4ws0:
    12. Domain for 4ws1:
    13. Domain for 4ws2:
      • 1837444Domain d4ws2a_: 4ws2 A: [274999]
        automated match to d3a7na_
        protein/DNA complex; complexed with 6ua, cit, cl, dms, ipa
    14. Domain for 4ws3:
    15. Domain for 4ws4:
      • 1837446Domain d4ws4a_: 4ws4 A: [274994]
        automated match to d3a7na_
        protein/DNA complex; complexed with 5nu, cit, cl, dms, ipa
    16. Domain for 4ws5:
    17. Domain for 4ws6:
      • 1837443Domain d4ws6a_: 4ws6 A: [274991]
        automated match to d3a7na_
        protein/DNA complex; complexed with cit, cl, dms, edo, ipa, wbu
    18. Domain for 4ws7:
    19. Domain for 4ws8:
  5. 1837467Staphylococcus aureus [TaxId:282458] [236655] (2 PDB entries)
    1. Domains for 3wdf:
      1. 1837468Domain d3wdfa_: 3wdf A: [236656]
        automated match to d1flza_
      2. 1837469Domain d3wdfb_: 3wdf B: [239911]
        automated match to d3wdfa_
    2. Domain for 3wdg:
  6. 1837471Sulfolobus tokodaii [TaxId:273063] [277049] (3 PDB entries)
    1. Domain for 4zbx:
    2. Domain for 4zby:
    3. Domain for 4zbz:

More info for Protein automated matches from c.18.1.0: automated matches

Timeline for Protein automated matches from c.18.1.0: automated matches: