Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2101206Fold c.18: Uracil-DNA glycosylase-like [52140] (1 superfamily)
    3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 2134
  4. 2101207Superfamily c.18.1: Uracil-DNA glycosylase-like [52141] (5 families) (S)
  5. 2101310Family c.18.1.0: automated matches [193165] (1 protein)
    not a true family
  6. 2101311Protein automated matches [193166] (6 species)
    not a true protein

Species:

  1. 2101312Bacillus subtilis [TaxId:224308] [193167] (2 PDB entries)
    1. Domain for 3zoq:
    2. Domain for 3zor:
  2. 2101315Deinococcus radiodurans [TaxId:243230] [224999] (1 PDB entry)
  3. 2101317Leishmania naiffi [TaxId:5678] [255787] (1 PDB entry)
  4. 2101319Mycobacterium tuberculosis [TaxId:83332] [231763] (19 PDB entries)
    1. Domains for 2zhx:
      1. 2101338Domain d2zhxa_: 2zhx A: [239057]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      2. 2101339Domain d2zhxc_: 2zhx C: [239058]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      3. 2101340Domain d2zhxe_: 2zhx E: [239059]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      4. 2101341Domain d2zhxg_: 2zhx G: [239060]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      5. 2101342Domain d2zhxi_: 2zhx I: [239061]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      6. 2101343Domain d2zhxk_: 2zhx K: [239062]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
      7. 2101344Domain d2zhxm_: 2zhx M: [239063]
        Other proteins in same PDB: d2zhxb_, d2zhxd_, d2zhxf_, d2zhxh_, d2zhxj_, d2zhxl_, d2zhxn_
        automated match to d3a7na_
        protein/DNA complex
    2. Domain for 3a7n:
    3. Domain for 4wpk:
    4. Domain for 4wpl:
    5. Domain for 4wru:
    6. Domain for 4wrv:
    7. Domain for 4wrw:
    8. Domain for 4wrx:
    9. Domain for 4wry:
    10. Domain for 4wrz:
    11. Domain for 4ws0:
    12. Domain for 4ws1:
    13. Domain for 4ws2:
    14. Domain for 4ws3:
    15. Domain for 4ws4:
    16. Domain for 4ws5:
    17. Domain for 4ws6:
    18. Domain for 4ws7:
    19. Domain for 4ws8:
  5. 2101345Staphylococcus aureus [TaxId:282458] [236655] (2 PDB entries)
    1. Domains for 3wdf:
      1. 2101346Domain d3wdfa_: 3wdf A: [236656]
        automated match to d1flza_
      2. 2101347Domain d3wdfb_: 3wdf B: [239911]
        automated match to d3wdfa_
    2. Domain for 3wdg:
  6. 2101349Sulfolobus tokodaii [TaxId:273063] [277049] (3 PDB entries)
    1. Domain for 4zbx:
    2. Domain for 4zby:
    3. Domain for 4zbz:

More info for Protein automated matches from c.18.1.0: automated matches

Timeline for Protein automated matches from c.18.1.0: automated matches: