Lineage for d4i08b1 (4i08 B:5-248)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

    has additional subdomain(s) that are not in the common domain
  6. 2842913Protein automated matches [190085] (59 species)
    not a true protein
  7. 2843511Species Vibrio cholerae [TaxId:243277] [189479] (8 PDB entries)
  8. 2843522Domain d4i08b1: 4i08 B:5-248 [192839]
    Other proteins in same PDB: d4i08a2, d4i08b2
    automated match to d3rshb_
    complexed with edo, ndp, so4

Details for d4i08b1

PDB Entry: 4i08 (more details), 2.06 Å

PDB Description: crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg) from vibrio cholerae in complex with nadph
PDB Compounds: (B:) 3-oxoacyl-[acyl-carrier-protein] reductase FabG

SCOPe Domain Sequences for d4i08b1:

Sequence, based on SEQRES records: (download)

>d4i08b1 c.2.1.2 (B:5-248) automated matches {Vibrio cholerae [TaxId: 243277]}
mnlegkvalvtgasrgigkaiaellaergakvigtatsesgaqaisdylgdngkgmalnv
tnpesieavlkaitdefggvdilvnnagitrdnllmrmkeeewsdimetnltsifrlska
vlrgmmkkrqgriinvgsvvgtmgnagqanyaaakagvigftksmarevasrgvtvntva
pgfietdmtkalndeqrtatlaqvpagrlgdpreiasavaflaspeaayitgetlhvngg
mymi

Sequence, based on observed residues (ATOM records): (download)

>d4i08b1 c.2.1.2 (B:5-248) automated matches {Vibrio cholerae [TaxId: 243277]}
mnlegkvalvtgasrgigkaiaellaergakvigtatsesgaqaisdylgdngkgmalnv
tnpesieavlkaitdefggvdilvnnagitrdnllmrmkeeewsdimetnltsifrlska
vlrgmmkkrqgriinvgsvvgtmgnagqanyaaakagvigftksmarevasrgvtvntva
pgfiettkalndeqrtatlaqvpagrlgdpreiasavaflaspeaayitgetlhvnggmy
mi

SCOPe Domain Coordinates for d4i08b1:

Click to download the PDB-style file with coordinates for d4i08b1.
(The format of our PDB-style files is described here.)

Timeline for d4i08b1:

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Domains from same chain:
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d4i08b2