SCOPe 2.08: Domain d1dkfb_: 1dkf B:

Lineage for d1dkfb_ (1dkf B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Retinoic acid receptor alpha (RAR-alpha) [48513] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48514] (2 PDB entries)

8. Domain d1dkfb_: 1dkf B: [19281]
   Other proteins in same PDB: d1dkfa_
   complexed with bms, ola

Details for d1dkfb_

PDB Entry: 1dkf, 2.5 Å

PDB Description: crystal structure of a heterodimeric complex of rar and rxr ligand- binding domains

PDB Compounds: (B:) protein (retinoic acid receptor-alpha)

SCOPe Domain Sequences for d1dkfb_:

Sequence, based on SEQRES records:

>d1dkfb_ a.123.1.1 (B:) Retinoic acid receptor alpha (RAR-alpha) {Human (Homo sapiens) [TaxId: 9606]}
pevgeliekvrkahqetfpalcqlgkyttnnsseqrvsldidlwdkfselstkciiktve
fakqlpgfttltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtqmhnag
fgpltdlvfafanqllplemddaetgllsaiclicgdrqdleqpdrvdmlqepllealkv
yvrkrrpsrphmfpkmlmkitdlrsisakgaervitlkmeipgsmppliqemlen

Sequence, based on observed residues (ATOM records):

>d1dkfb_ a.123.1.1 (B:) Retinoic acid receptor alpha (RAR-alpha) {Human (Homo sapiens) [TaxId: 9606]}
pevgeliekvrkahqetfpalcqlgkyttseqrvsldidlwdkfselstkciiktvefak
qlpgfttltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtqmhnagfgp
ltdlvfafanqllplemddaetgllsaiclicgdrqdleqpdrvdmlqepllealkvyvr
krrpsrphmfpkmlmkitdlrsisakgaervitlkmeipgsmppliqemlen

Timeline for d1dkfb_:

• d1dkfb_ first appeared (with stable ids) in SCOP 1.55
  
• d1dkfb_ appears in SCOPe 2.07