SCOPe 2.05: Domain d1dkfa_: 1dkf A:

Lineage for d1dkfa_ (1dkf A:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [48512] (3 PDB entries)
   Uniprot P28700 232-463

8. Domain d1dkfa_: 1dkf A: [19280]
   Other proteins in same PDB: d1dkfb_
   complexed with bms, ola

Details for d1dkfa_

PDB Entry: 1dkf, 2.5 Å

PDB Description: crystal structure of a heterodimeric complex of rar and rxr ligand- binding domains

PDB Compounds: (A:) protein (retinoid x receptor-alpha)

SCOPe Domain Sequences for d1dkfa_:

Sequence, based on SEQRES records:

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus) [TaxId: 10090]}
sanedmpvekileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewak
riphfselplddqvillragwnelliasashrsiavkdgillatglhvhrnsahsagvga
ifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayc
khkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea

Sequence, based on observed residues (ATOM records):

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus) [TaxId: 10090]}
sanedmpvekileaelaveppndpvtnicqaadkqlftlvewakriphfselplddqvil
lragwnelliasashrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdm
qmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklll
rlpalrsiglkclehlfffkligdtpidtflmemlea

Timeline for d1dkfa_:

• d1dkfa_ first appeared (with stable ids) in SCOP 1.55
  
• d1dkfa_ appears in SCOPe 2.04
  
• d1dkfa_ appears in SCOPe 2.06
  
• d1dkfa_ appears in the current release, SCOPe 2.08