SCOP 1.71: Domain d1dkfa_: 1dkf A:

Lineage for d1dkfa_ (1dkf A:)

1. Root: SCOP 1.71

2. Class a: All alpha proteins [46456] (226 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)

6. Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [48512] (2 PDB entries)

8. Domain d1dkfa_: 1dkf A: [19280]
   Other proteins in same PDB: d1dkfb_
   complexed with bms, oli; mutant

Details for d1dkfa_

PDB Entry: 1dkf, 2.5 Å

PDB Description: crystal structure of a heterodimeric complex of rar and rxr ligand- binding domains

SCOP Domain Sequences for d1dkfa_:

Sequence, based on SEQRES records:

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus)}
sanedmpvekileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewak
riphfselplddqvillragwnelliasashrsiavkdgillatglhvhrnsahsagvga
ifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayc
khkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea

Sequence, based on observed residues (ATOM records):

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus)}
sanedmpvekileaelaveppndpvtnicqaadkqlftlvewakriphfselplddqvil
lragwnelliasashrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdm
qmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklll
rlpalrsiglkclehlfffkligdtpidtflmemlea

Timeline for d1dkfa_:

• d1dkfa_ first appeared (with stable ids) in SCOP 1.55
  
• d1dkfa_ appears in SCOP 1.69
  
• d1dkfa_ appears in SCOP 1.73
  
• d1dkfa_ appears in the current release, SCOPe 2.08