Lineage for d1dkfa_ (1dkf A:)

  1. Root: SCOP 1.71
  2. 530466Class a: All alpha proteins [46456] (226 folds)
  3. 543419Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 543420Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family) (S)
  5. 543421Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)
  6. 543673Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)
  7. 543703Species Mouse (Mus musculus) [TaxId:10090] [48512] (2 PDB entries)
  8. 543704Domain d1dkfa_: 1dkf A: [19280]
    Other proteins in same PDB: d1dkfb_
    complexed with bms, oli; mutant

Details for d1dkfa_

PDB Entry: 1dkf (more details), 2.5 Å

PDB Description: crystal structure of a heterodimeric complex of rar and rxr ligand- binding domains

SCOP Domain Sequences for d1dkfa_:

Sequence, based on SEQRES records: (download)

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus)}
sanedmpvekileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewak
riphfselplddqvillragwnelliasashrsiavkdgillatglhvhrnsahsagvga
ifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayc
khkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea

Sequence, based on observed residues (ATOM records): (download)

>d1dkfa_ a.123.1.1 (A:) Retinoid-X receptor alpha (RXR-alpha) {Mouse (Mus musculus)}
sanedmpvekileaelaveppndpvtnicqaadkqlftlvewakriphfselplddqvil
lragwnelliasashrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdm
qmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklll
rlpalrsiglkclehlfffkligdtpidtflmemlea

SCOP Domain Coordinates for d1dkfa_:

Click to download the PDB-style file with coordinates for d1dkfa_.
(The format of our PDB-style files is described here.)

Timeline for d1dkfa_: