Lineage for d4f13a1 (4f13 A:6-356)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2007005Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 2007336Superfamily a.102.3: Chondroitin AC/alginate lyase [48230] (2 families) (S)
    incomplete toroid
  5. 2007337Family a.102.3.1: Alginate lyase A1-III [48231] (1 protein)
  6. 2007338Protein Alginate lyase A1-III [48232] (1 species)
  7. 2007339Species Sphingomonas sp., A1 [TaxId:28214] [48233] (8 PDB entries)
  8. 2007348Domain d4f13a1: 4f13 A:6-356 [192411]
    Other proteins in same PDB: d4f13a2, d4f13b2

Details for d4f13a1

PDB Entry: 4f13 (more details), 2.21 Å

PDB Description: alginate lyase a1-iii y246f complexed with tetrasaccharide
PDB Compounds: (A:) Alginate lyase

SCOPe Domain Sequences for d4f13a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4f13a1 a.102.3.1 (A:6-356) Alginate lyase A1-III {Sphingomonas sp., A1 [TaxId: 28214]}
hpfdqavvkdptasyvdvkarrtflqsgqlddrlkaalpkeydctteatpnpqqgemvip
rrylsgnhgpvnpdyepvvtlyrdfekisatlgnlyvatgkpvyatcllnmldkwakada
llnydpksqswyqvewsaataafalstmmaepnvdtaqrervvkwlnrvarhqtsfpggd
tsccnnhsywrgqeatiigviskddelfrwglgryvqamglinedgsfvhemtrheqslh
fqnyamlpltmiaetasrqgidlyaykengrdihsarkfvfaavknpdlikkyasepqdt
rafkpgrgdlnwieyqrarfgfadelgfmtvpifdprtggsatllaykpqg

SCOPe Domain Coordinates for d4f13a1:

Click to download the PDB-style file with coordinates for d4f13a1.
(The format of our PDB-style files is described here.)

Timeline for d4f13a1:

View in 3D
Domains from same chain:
(mouse over for more information)
d4f13a2