SCOPe 2.08: Domain d1ygea1: 1yge A:150-839

Lineage for d1ygea1 (1yge A:150-839)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.119: Lipoxigenase [48483] (1 superfamily)
   multihelical
   large nearly all-alpha domain

4. Superfamily a.119.1: Lipoxigenase [48484] (3 families)

5. Family a.119.1.1: Plant lipoxigenases [48485] (2 proteins)
   automatically mapped to Pfam PF00305

6. Protein Lipoxigenase, C-terminal domain [48486] (2 species)
   N-terminal domain is beta-sandwich similar to colipase-binding domain of pancreatic lipase
   contains alpha plus beta subdomain: res. 341-495; alpha-beta(5)-alpha

7. Species Soybean (Glycine max), isozyme L1 [TaxId:3847] [48487] (22 PDB entries)

8. Domain d1ygea1: 1yge A:150-839 [19234]
   Other proteins in same PDB: d1ygea2
   complexed with fe

Details for d1ygea1

PDB Entry: 1yge, 1.4 Å

PDB Description: lipoxygenase-1 (soybean) at 100k

PDB Compounds: (A:) lipoxygenase-1

SCOPe Domain Sequences for d1ygea1:

Sequence; same for both SEQRES and ATOM records:

>d1ygea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
vpsetpaplvsyreeelkslrgngtgerkeydriydydvyndlgnpdkseklarpvlggs
stfpyprrgrtgrgptvtdpntekqgevfyvprdenlghlkskdaleigtkslsqivqpa
fesafdlkstpiefhsfqdvhdlyeggiklprdvistiiplpvikelyrtdgqhilkfpq
phvvqvsqsawmtdeefaremiagvnpcvirgleefppksnldpaiygdqsskitadsld
ldgytmdealgsrrlfmldyhdifmpyvrqinqlnsaktyatrtilflredgtlkpvaie
lslphsagdlsaavsqvvlpakegvestiwllakayvivndscyhqlmshwlnthaamep
fviathrhlsvlhpiyklltphyrnnmninalarqslinangiiettflpskysvemssa
vyknwvftdqalpadlikrgvaikdpstphgvrlliedypyaadgleiwaaiktwvqeyv
plyyardddvkndselqhwwkeavekghgdlkdkpwwpklqtledlvevcliiiwiasal
haavnfgqypygglimnrptasrrllpekgtpeyeeminnhekaylrtitsklptlisls
vieilsthasdevylgqrdnphwtsdskalqafqkfgnklkeieeklvrrnndpslqgnr
lgpvqlpytllypsseegltfrgipnsisi

Timeline for d1ygea1:

• d1ygea1 first appeared (with stable ids) in SCOP 1.55, called d1yge_1
  
• d1ygea1 appears in SCOPe 2.07