SCOPe 2.08: Domain d4djob_: 4djo B:

Lineage for d4djob_ (4djo B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.50: Acid proteases [50629] (1 superfamily)
   barrel, closed; n=6, S=10, complex topology

4. Superfamily b.50.1: Acid proteases [50630] (4 families)

5. Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
   dimer of identical mono-domain chains, each containing (6,10) barrel

6. Protein Human immunodeficiency virus type 1 protease [50632] (9 species)

7. Species Human immunodeficiency virus 1 [TaxId:11676] [224867] (58 PDB entries)

8. Domain d4djob_: 4djo B: [192331]
   automated match to d2f3ka_
   complexed with act, gol, mk5, po4

Details for d4djob_

PDB Entry: 4djo, 1.78 Å

PDB Description: crystal structure of wild-type hiv-1 protease in complex with mkp56

PDB Compounds: (B:) Pol polyprotein

SCOPe Domain Sequences for d4djob_:

Sequence; same for both SEQRES and ATOM records:

>d4djob_ b.50.1.1 (B:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus 1 [TaxId: 11676]}
pqitlwkrplvtiriggqlkealldtgaddtvleemnlpgkwkpkmiggiggfikvrqyd
qipieicghkaigtvlvgptpvniigrnlltqigctlnf

Timeline for d4djob_:

• d4djob_ first appeared in SCOPe 2.02
  
• d4djob_ appears in SCOPe 2.07