Lineage for d3mgqd_ (3mgq D:)

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1082620Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 1082621Superfamily a.22.1: Histone-fold [47113] (4 families) (S)
  5. 1082622Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
    form octamers composed of two copies of each of the four histones
  6. 1082716Protein Histone H2B [47119] (6 species)
  7. 1082717Species African clawed frog (Xenopus laevis) [TaxId:8355] [47121] (35 PDB entries)
  8. 1082758Domain d3mgqd_: 3mgq D: [191778]
    Other proteins in same PDB: d3mgqa_, d3mgqb_, d3mgqc_, d3mgqe_, d3mgqf_, d3mgqg_
    automated match to d1kx5d_
    protein/DNA complex; complexed with cl, ni

Details for d3mgqd_

PDB Entry: 3mgq (more details), 2.65 Å

PDB Description: binding of nickel ions to the nucleosome core particle
PDB Compounds: (D:) Histone H2B 1.1

SCOPe Domain Sequences for d3mgqd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3mgqd_ a.22.1.1 (D:) Histone H2B {African clawed frog (Xenopus laevis) [TaxId: 8355]}
gkkrrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynk
rstitsreiqtavrlllpgelakhavsegtkavtkytsak

SCOPe Domain Coordinates for d3mgqd_:

Click to download the PDB-style file with coordinates for d3mgqd_.
(The format of our PDB-style files is described here.)

Timeline for d3mgqd_: