SCOPe 2.07: Family c.93.1.0: automated matches

Lineage for Family c.93.1.0: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
parallel beta-sheet of 6 strands, order 213456
Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
Similar in architecture to the superfamily II but partly differs in topology
Family c.93.1.0: automated matches [191439] (1 protein)
not a true family

Protein:

automated matches [190646] (74 species)
not a true protein
1. Species Actinobacillus succinogenes [TaxId:339671] [188337] (2 PDB entries)
2. Species Actinomyces odontolyticus [TaxId:411466] [275552] (1 PDB entry)
3. Species Agrobacterium radiobacter [TaxId:311403] [268807] (1 PDB entry)
4. Species Agrobacterium tumefaciens [TaxId:176299] [225916] (8 PDB entries)
5. Species Agrobacterium vitis [TaxId:311402] [261009] (3 PDB entries)
6. Species Alkaliphilus metalliredigens [TaxId:293826] [255780] (1 PDB entry)
7. Species Anabaena variabilis [TaxId:240292] [256373] (9 PDB entries)
8. Species Arthrobacter sp. [TaxId:290399] [260960] (2 PDB entries)
9. Species Bacillus cytotoxicus [TaxId:315749] [225781] (1 PDB entry)
10. Species Bacillus halodurans [TaxId:272558] [270918] (2 PDB entries)
11. Species Bacillus subtilis [TaxId:1423] [226286] (2 PDB entries)
12. Species Bacteroides fragilis [TaxId:272559] [267837] (1 PDB entry)
13. Species Bacteroides thetaiotaomicron [TaxId:226186] [311253] (1 PDB entry)
14. Species Bifidobacterium animalis [TaxId:442563] [328754] (1 PDB entry)
15. Species Bifidobacterium animalis [TaxId:555970] [256375] (1 PDB entry)
16. Species Brachyspira murdochii [TaxId:526224] [311391] (1 PDB entry)
17. Species Brucella melitensis [TaxId:224914] [228825] (1 PDB entry)
18. Species Burkholderia graminis [TaxId:396598] [314777] (1 PDB entry)
19. Species Burkholderia multivorans [TaxId:395019] [271594] (1 PDB entry)
20. Species Burkholderia phymatum [TaxId:391038] [231274] (1 PDB entry)
21. Species Burkholderia thailandensis [TaxId:271848] [225530] (2 PDB entries)
22. Species Caulobacter crescentus [TaxId:190650] [229832] (1 PDB entry)
23. Species Chloroflexus aggregans [TaxId:326427] [267824] (1 PDB entry)
24. Species Chromobacterium violaceum [TaxId:536] [255861] (1 PDB entry)
25. Species Clostridium acetobutylicum [TaxId:272562] [255840] (1 PDB entry)
26. Species Clostridium phytofermentans [TaxId:357809] [231861] (2 PDB entries)
27. Species Corynebacterium glutamicum [TaxId:1718] [225651] (2 PDB entries)
28. Species Corynebacterium glutamicum [TaxId:196627] [255762] (1 PDB entry)
29. Species Desulfitobacterium hafniense [TaxId:272564] [228009] (2 PDB entries)
30. Species Enterococcus faecalis [TaxId:226185] [231906] (2 PDB entries)
31. Species Enterococcus faecium [TaxId:333849] [260801] (1 PDB entry)
32. Species Escherichia coli K-12 [TaxId:83333] [225166] (3 PDB entries)
33. Species Escherichia coli [TaxId:511145] [311314] (3 PDB entries)
34. Species Exiguobacterium sibiricum [TaxId:262543] [255918] (1 PDB entry)
35. Species Hahella chejuensis [TaxId:349521] [196493] (1 PDB entry)
36. Species Human (Homo sapiens) [TaxId:9606] [189363] (15 PDB entries)
37. Species Klebsiella pneumoniae [TaxId:272620] [188448] (2 PDB entries)
38. Species Kribbella flavida [TaxId:479435] [311395] (1 PDB entry)
39. Species Lactobacillus acidophilus [TaxId:1579] [196560] (1 PDB entry)
40. Species Lactobacillus brevis [TaxId:387344] [225768] (1 PDB entry)
41. Species Lactobacillus casei [TaxId:321967] [260805] (4 PDB entries)
42. Species Legionella pneumophila [TaxId:272624] [233482] (1 PDB entry)
43. Species Mannheimia haemolytica [TaxId:272629] [268809] (1 PDB entry)
44. Species Mouse (Mus musculus) [TaxId:10090] [320091] (1 PDB entry)
45. Species Mycobacterium smegmatis [TaxId:246196] [232714] (3 PDB entries)
46. Species Norway rat (Rattus norvegicus) [TaxId:10116] [311293] (5 PDB entries)
47. Species Ochrobactrum anthropi [TaxId:439375] [273627] (1 PDB entry)
48. Species Oryzias latipes [TaxId:8090] [334713] (5 PDB entries)
49. Species Rhizobium etli [TaxId:347834] [232922] (1 PDB entry)
50. Species Rhodobacter sphaeroides [TaxId:272943] [196489] (1 PDB entry)
51. Species Rhodobacter sphaeroides [TaxId:349102] [196798] (1 PDB entry)
52. Species Rhodococcus jostii [TaxId:101510] [196515] (1 PDB entry)
53. Species Rhodopseudomonas palustris [TaxId:1076] [255983] (3 PDB entries)
54. Species Rhodopseudomonas palustris [TaxId:258594] [311390] (1 PDB entry)
55. Species Rhodopseudomonas palustris [TaxId:316057] [267894] (8 PDB entries)
56. Species Rhodopseudomonas palustris [TaxId:316058] [256081] (3 PDB entries)
57. Species Rhodospirillum rubrum [TaxId:269796] [255869] (1 PDB entry)
58. Species Sanguibacter keddieii [TaxId:446469] [197268] (1 PDB entry)
59. Species Silicibacter pomeroyi [TaxId:89184] [255808] (1 PDB entry)
60. Species Staphylococcus aureus [TaxId:158878] [232454] (1 PDB entry)
61. Species Staphylococcus haemolyticus [TaxId:279808] [255868] (1 PDB entry)
62. Species Staphylococcus saprophyticus [TaxId:342451] [225319] (2 PDB entries)
63. Species Streptococcus pneumoniae [TaxId:637987] [234486] (1 PDB entry)
64. Species Thermotoga maritima [TaxId:2336] [255200] (2 PDB entries)
65. Species Thermotoga maritima [TaxId:243274] [187722] (4 PDB entries)
66. Species Thermus thermophilus [TaxId:274] [230757] (1 PDB entry)
67. Species Verminephrobacter eiseniae [TaxId:391735] [268821] (1 PDB entry)
68. Species Vibrio parahaemolyticus [TaxId:670] [225484] (1 PDB entry)
69. Species Weissella paramesenteroides [TaxId:585506] [260797] (2 PDB entries)
70. Species Yersinia pestis [TaxId:1035377] [268812] (1 PDB entry)
71. Species Lactobacillus paracasei [TaxId:321967] [350156] (1 PDB entry)
72. Species Thermobifida fusca [TaxId:269800] [356586] (1 PDB entry)
73. Species Klebsiella pneumoniae [TaxId:72407] [361729] (1 PDB entry)
74. Species Clostridium saccharobutylicum [TaxId:1345695] [364396] (1 PDB entry)

More info for Family c.93.1.0: automated matches

Timeline for Family c.93.1.0: automated matches:

Family c.93.1.0: automated matches first appeared in SCOPe 2.01
Family c.93.1.0: automated matches appears in SCOPe 2.06