SCOPe 2.07: Family c.69.1.0: automated matches

Lineage for Family c.69.1.0: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
many members have left-handed crossover connection between strand 8 and additional strand 9
Family c.69.1.0: automated matches [191404] (1 protein)
not a true family

Protein:

automated matches [190543] (124 species)
not a true protein
1. Species Aeromonas punctata [TaxId:648] [232631] (8 PDB entries)
2. Species Agrobacterium tumefaciens [TaxId:176299] [188961] (3 PDB entries)
3. Species Anopheles gambiae [TaxId:7165] [348788] (3 PDB entries)
4. Species Archaeoglobus fulgidus [TaxId:2234] [317715] (1 PDB entry)
5. Species Bacillus anthracis [TaxId:198094] [188737] (1 PDB entry)
6. Species Bacillus anthracis [TaxId:261594] [346321] (1 PDB entry)
7. Species Bacillus megaterium [TaxId:1404] [236718] (4 PDB entries)
8. Species Bacillus sp. [TaxId:129908] [256061] (7 PDB entries)
9. Species Bacillus subtilis [TaxId:1423] [225226] (4 PDB entries)
10. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [316344] (2 PDB entries)
11. Species Baliospermum montanum [TaxId:316758] [260622] (2 PDB entries)
12. Species Bradyrhizobium elkanii [TaxId:29448] [256834] (2 PDB entries)
13. Species Bradyrhizobium elkanii [TaxId:398524] [393500] (1 PDB entry)
14. Species Bradyrhizobium japonicum [TaxId:224911] [267820] (1 PDB entry)
15. Species Bradyrhizobium japonicum [TaxId:375] [267819] (3 PDB entries)
16. Species Burkholderia ambifaria [TaxId:398577] [335497] (1 PDB entry)
17. Species Burkholderia cenocepacia [TaxId:216591] [261487] (3 PDB entries)
18. Species Burkholderia cenocepacia [TaxId:406425] [402020] (1 PDB entry)
19. Species Burkholderia sp. [TaxId:36773] [267823] (1 PDB entry)
20. Species Burkholderia sp. [TaxId:384033] [267766] (1 PDB entry)
21. Species Burkholderia xenovorans [TaxId:266265] [196380] (1 PDB entry)
22. Species Burkholderiales bacterium [TaxId:1797562] [404889] (1 PDB entry)
23. Species Candidatus nitrososphaera [TaxId:497727] [319280] (1 PDB entry)
24. Species Caulobacter crescentus [TaxId:190650] [317952] (1 PDB entry)
25. Species Chitinophaga pinensis [TaxId:485918] [238323] (1 PDB entry)
26. Species Culex quinquefasciatus [TaxId:7176] [337959] (1 PDB entry)
27. Species Cycloclasticus sp. [TaxId:385025] [256296] (1 PDB entry)
28. Species Dyadobacter fermentans [TaxId:471854] [256280] (1 PDB entry)
29. Species Environmental samples [TaxId:33858] [270859] (1 PDB entry)
30. Species Erythrobacter longus [TaxId:1044] [388858] (4 PDB entries)
31. Species Escherichia coli [TaxId:562] [188027] (1 PDB entry)
32. Species Escherichia coli [TaxId:83334] [274143] (1 PDB entry)
33. Species Exiguobacterium antarcticum [TaxId:1087448] [327921] (1 PDB entry)
34. Species Ferroplasma acidiphilum [TaxId:74969] [346322] (1 PDB entry)
35. Species Francisella tularensis [TaxId:177416] [256250] (1 PDB entry)
36. Species Fungus (Aspergillus oryzae) [TaxId:5062] [189066] (2 PDB entries)
37. Species Fungus (Humicola insolens) [TaxId:34413] [257354] (2 PDB entries)
38. Species Galerina marginata [TaxId:109633] [340905] (1 PDB entry)
39. Species Geobacillus sp. [TaxId:1629723] [351942] (1 PDB entry)
40. Species Geobacillus stearothermophilus [TaxId:1422] [187958] (2 PDB entries)
41. Species Glaciozyma antarctica [TaxId:105987] [340754] (1 PDB entry)
42. Species Glomerella cingulata [TaxId:5457] [188664] (3 PDB entries)
43. Species Human (Homo sapiens) [TaxId:9606] [188340] (94 PDB entries)
44. Species Hypocrea jecorina [TaxId:431241] [334994] (1 PDB entry)
45. Species Ideonella sakaiensis [TaxId:1547922] [343272] (26 PDB entries)
46. Species Lactobacillus rhamnosus [TaxId:486408] [188926] (5 PDB entries)
47. Species Lactococcus lactis [TaxId:272623] [189573] (1 PDB entry)
48. Species Lycopersicon hirsutum [TaxId:283673] [195413] (6 PDB entries)
49. Species Malbranchea cinnamomea [TaxId:5041] [348512] (1 PDB entry)
50. Species Marinobacter sp. [TaxId:270374] [355180] (1 PDB entry)
51. Species Mesorhizobium loti [TaxId:381] [267849] (1 PDB entry)
52. Species Mouse (Mus musculus) [TaxId:10090] [188313] (1 PDB entry)
53. Species Mycobacterium abscessus [TaxId:561007] [336741] (1 PDB entry)
54. Species Mycobacterium hassiacum [TaxId:1122247] [336694] (1 PDB entry)
55. Species Mycobacterium rhodesiae [TaxId:931627] [269240] (1 PDB entry)
56. Species Mycobacterium smegmatis [TaxId:1772] [373589] (3 PDB entries)
57. Species Mycobacterium tuberculosis [TaxId:1773] [232505] (4 PDB entries)
58. Species Mycobacterium tuberculosis [TaxId:83331] [332690] (1 PDB entry)
59. Species Mycobacterium tuberculosis [TaxId:83332] [189096] (10 PDB entries)
60. Species Myotis davidii [TaxId:225400] [377687] (1 PDB entry)
61. Species Myxococcus xanthus [TaxId:34] [224966] (1 PDB entry)
62. Species Neisseria meningitidis [TaxId:122586] [194329] (1 PDB entry)
63. Species Norway rat (Rattus norvegicus) [TaxId:10116] [188292] (9 PDB entries)
64. Species Nostoc sp. [TaxId:103690] [256046] (1 PDB entry)
65. Species Novosphingobium capsulatum [TaxId:13688] [254989] (1 PDB entry)
66. Species Oleispira antarctica [TaxId:188908] [196342] (3 PDB entries)
67. Species Ophiostoma piceae [TaxId:61273] [256199] (3 PDB entries)
68. Species Paenibacillus sp. [TaxId:1079050] [358406] (1 PDB entry)
69. Species Paenibacillus sp. [TaxId:1986222] [384282] (1 PDB entry)
70. Species Parabacteroides distasonis [TaxId:435591] [257605] (1 PDB entry)
71. Species Paraglaciecola agarilytica [TaxId:1125747] [401628] (1 PDB entry)
72. Species Paraphoma sp. [TaxId:1804209] [390066] (2 PDB entries)
73. Species Pelagibacterium halotolerans [TaxId:1082931] [324418] (1 PDB entry)
74. Species Pelosinus fermentans [TaxId:1122947] [278791] (1 PDB entry)
75. Species Penicillium expansum [TaxId:27334] [232252] (1 PDB entry)
76. Species Petunia hybrida [TaxId:4102] [256236] (7 PDB entries)
77. Species Physcomitrella patens [TaxId:3218] [364340] (4 PDB entries)
78. Species Pig (Sus scrofa) [TaxId:9823] [226476] (2 PDB entries)
79. Species Planctomycetes bacterium [TaxId:1331910] [273731] (5 PDB entries)
80. Species Plesiocystis pacifica [TaxId:191768] [196240] (1 PDB entry)
81. Species Proteus mirabilis [TaxId:529507] [229463] (1 PDB entry)
82. Species Pseudoalteromonas haloplanktis [TaxId:326442] [189288] (1 PDB entry)
83. Species Pseudomonas aeruginosa [TaxId:208963] [255906] (33 PDB entries)
84. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [189478] (7 PDB entries)
85. Species Pseudomonas aestusnigri [TaxId:857252] [381491] (2 PDB entries)
86. Species Psychrobacter cryohalolentis [TaxId:335284] [365263] (1 PDB entry)
87. Species Pyrobaculum calidifontis [TaxId:181486] [226132] (1 PDB entry)
88. Species Pyrobaculum calidifontis [TaxId:410359] [226193] (2 PDB entries)
89. Species Renilla reniformis [TaxId:6136] [225269] (7 PDB entries)
90. Species Rhizomucor miehei [TaxId:1031333] [346323] (1 PDB entry)
91. Species Rhizomucor miehei [TaxId:4839] [274645] (1 PDB entry)
92. Species Rhodobacter sphaeroides [TaxId:1063] [346324] (1 PDB entry)
93. Species Rhodobacter sphaeroides [TaxId:272943] [346325] (1 PDB entry)
94. Species Rhodococcus sp. [TaxId:1831] [278711] (1 PDB entry)
95. Species Rhodopseudomonas palustris [TaxId:1076] [267879] (11 PDB entries)
96. Species Rhodopseudomonas palustris [TaxId:258594] [329218] (38 PDB entries)
97. Species Rhodopseudomonas palustris [TaxId:74570] [347051] (1 PDB entry)
98. Species Salmonella enterica [TaxId:90371] [225883] (1 PDB entry)
99. Species Salmonella enterica [TaxId:99287] [311402] (1 PDB entry)
100. Species Serratia proteamaculans [TaxId:28151] [395713] (5 PDB entries)
101. Species Shewanella frigidimarina [TaxId:56812] [373603] (1 PDB entry)
102. Species Sphingomonas wittichii [TaxId:392499] [227977] (5 PDB entries)
103. Species Staphylococcus aureus [TaxId:1280] [231572] (1 PDB entry)
104. Species Streptomyces ambofaciens [TaxId:278992] [389953] (3 PDB entries)
105. Species Streptomyces lavendulae [TaxId:58340] [346326] (2 PDB entries)
106. Species Striga hermonthica [TaxId:68872] [278337] (16 PDB entries)
107. Species Sulfolobus islandicus [TaxId:930945] [337177] (1 PDB entry)
108. Species Sulfolobus shibatae [TaxId:2286] [258106] (2 PDB entries)
109. Species Sulfolobus solfataricus [TaxId:2287] [337489] (1 PDB entry)
110. Species Sulfolobus tokodaii [TaxId:111955] [226148] (5 PDB entries)
111. Species Tetronarce californica [TaxId:7787] [360188] (2 PDB entries)
112. Species Thalassospira sp. [TaxId:1485225] [280473] (1 PDB entry)
113. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [188958] (22 PDB entries)
114. Species Thermoanaerobacterium sp. [TaxId:60708] [255827] (1 PDB entry)
115. Species Thermomyces lanuginosus [TaxId:5541] [385799] (1 PDB entry)
116. Species Thermoplasma acidophilum [TaxId:273075] [188276] (1 PDB entry)
117. Species Trichoderma reesei [TaxId:334564] [377080] (5 PDB entries)
118. Species Tuber melanosporum [TaxId:656061] [338192] (2 PDB entries)
119. Species Uncultured archaeon [TaxId:115547] [187518] (1 PDB entry)
120. Species Uncultured bacterium [TaxId:77133] [196706] (43 PDB entries)
121. Species Unknown prokaryotic [TaxId:2725] [398887] (1 PDB entry)
122. Species Vaccaria hispanica [TaxId:39387] [347033] (4 PDB entries)
123. Species Yarrowia lipolytica [TaxId:4952] [189520] (2 PDB entries)
124. Species Zea mays [TaxId:4577] [349272] (1 PDB entry)

More info for Family c.69.1.0: automated matches

Timeline for Family c.69.1.0: automated matches:

Family c.69.1.0: automated matches first appeared in SCOPe 2.01
Family c.69.1.0: automated matches appears in SCOPe 2.06
Family c.69.1.0: automated matches appears in the current release, SCOPe 2.08