SCOPe 2.08: Family a.4.5.0: automated matches

Lineage for Family a.4.5.0: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.0: automated matches [191329] (1 protein)
not a true family

Protein:

automated matches [190154] (92 species)
not a true protein
1. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [419831] (1 PDB entry)
2. Species Archaeoglobus fulgidus [TaxId:2234] [255541] (1 PDB entry)
3. Species Bacillus cereus [TaxId:222523] [188293] (2 PDB entries)
4. Species Bacillus cereus [TaxId:226900] [186878] (2 PDB entries)
5. Species Bacillus halodurans [TaxId:272558] [377691] (4 PDB entries)
6. Species Bacillus subtilis [TaxId:1423] [187193] (9 PDB entries)
7. Species Bacillus subtilis [TaxId:224308] [321300] (5 PDB entries)
8. Species Bacillus subtilis [TaxId:655816] [341938] (5 PDB entries)
9. Species Bacteroides fragilis [TaxId:272559] [330755] (1 PDB entry)
10. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [364720] (1 PDB entry)
11. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [380069] (1 PDB entry)
12. Species Bordetella bronchiseptica [TaxId:518] [376530] (1 PDB entry)
13. Species Campylobacter jejuni [TaxId:192222] [346167] (1 PDB entry)
14. Species Campylobacter jejuni [TaxId:197] [352445] (2 PDB entries)
15. Species Campylobacter jejuni [TaxId:32022] [195104] (2 PDB entries)
16. Species Carboxydothermus hydrogenoformans [TaxId:129958] [225204] (1 PDB entry)
17. Species Clarkia breweri [TaxId:36903] [226317] (5 PDB entries)
18. Species Clostridium acetobutylicum [TaxId:1488] [189157] (1 PDB entry)
19. Species Corynebacterium diphtheriae [TaxId:1717] [255849] (1 PDB entry)
20. Species Corynebacterium glutamicum [TaxId:1718] [226340] (2 PDB entries)
21. Species Deinococcus radiodurans [TaxId:243230] [272918] (2 PDB entries)
22. Species Eggerthella lenta [TaxId:479437] [226359] (2 PDB entries)
23. Species Enterobacter cloacae [TaxId:550] [328722] (1 PDB entry)
24. Species Enterococcus faecalis [TaxId:1351] [188913] (1 PDB entry)
25. Species Escherichia coli [311127] (3 PDB entries)
26. Species Escherichia coli K-12 [TaxId:83333] [225713] (14 PDB entries)
27. Species Escherichia coli [TaxId:469008] [255648] (1 PDB entry)
28. Species Escherichia coli [TaxId:83333] [260606] (3 PDB entries)
29. Species Escherichia coli [TaxId:83334] [335234] (1 PDB entry)
30. Species Fragaria ananassa [TaxId:3747] [377209] (5 PDB entries)
31. Species Francisella tularensis [TaxId:263] [352126] (2 PDB entries)
32. Species Helicobacter pylori [TaxId:85962] [189614] (1 PDB entry)
33. Species Human (Homo sapiens) [TaxId:9606] [186924] (29 PDB entries)
34. Species Lactobacillus plantarum [TaxId:1590] [189101] (1 PDB entry)
35. Species Lactococcus lactis [TaxId:1359] [352121] (1 PDB entry)
36. Species Lactococcus lactis [TaxId:416870] [188710] (8 PDB entries)
37. Species Leptospira interrogans [TaxId:267671] [341818] (1 PDB entry)
38. Species Linum nodiflorum [TaxId:407264] [234362] (3 PDB entries)
39. Species Listeria monocytogenes [TaxId:1639] [369549] (2 PDB entries)
40. Species Lolium perenne [TaxId:4522] [226053] (3 PDB entries)
41. Species Magnetospirillum gryphiswaldense [TaxId:1430440] [274898] (6 PDB entries)
42. Species Medicago truncatula [TaxId:3880] [225107] (5 PDB entries)
43. Species Methanobacterium thermoautotrophicum [TaxId:145262] [225456] (2 PDB entries)
44. Species Mouse (Mus musculus) [TaxId:10090] [189892] (3 PDB entries)
45. Species Mycobacterium bovis [TaxId:233413] [255852] (2 PDB entries)
46. Species Mycobacterium tuberculosis [TaxId:1773] [187939] (6 PDB entries)
47. Species Mycobacterium tuberculosis [TaxId:83332] [232395] (4 PDB entries)
48. Species Neisseria meningitidis [TaxId:122586] [231118] (3 PDB entries)
49. Species Nematode (Brugia malayi) [TaxId:6279] [255498] (1 PDB entry)
50. Species Papaver somniferum [TaxId:3469] [420017] (1 PDB entry)
51. Species Peptoclostridium difficile [TaxId:1496] [326301] (1 PDB entry)
52. Species Peptoclostridium difficile [TaxId:645463] [323539] (1 PDB entry)
53. Species Peucedanum praeruptorum [TaxId:312531] [352603] (2 PDB entries)
54. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [368490] (1 PDB entry)
55. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [256270] (3 PDB entries)
56. Species Pyrococcus horikoshii [TaxId:53953] [255098] (1 PDB entry)
57. Species Rhizobium leguminosarum [TaxId:387] [327554] (2 PDB entries)
58. Species Rhodobacter capsulatus [TaxId:1061] [383009] (5 PDB entries)
59. Species Silicibacter pomeroyi [TaxId:246200] [225430] (2 PDB entries)
60. Species Silicibacter pomeroyi [TaxId:89184] [232048] (1 PDB entry)
61. Species Sinorhizobium fredii [TaxId:380] [311408] (2 PDB entries)
62. Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [255485] (1 PDB entry)
63. Species Sorghum (Sorghum bicolor) [TaxId:4558] [258128] (2 PDB entries)
64. Species Sphinx1.76-related dna [TaxId:1515702] [368832] (1 PDB entry)
65. Species Staphylococcus aureus [TaxId:1280] [193082] (9 PDB entries)
66. Species Staphylococcus aureus [TaxId:158878] [188763] (1 PDB entry)
67. Species Staphylococcus aureus [TaxId:426430] [225722] (4 PDB entries)
68. Species Staphylococcus epidermidis [TaxId:176279] [226549] (1 PDB entry)
69. Species Streptococcus agalactiae [TaxId:216495] [346168] (2 PDB entries)
70. Species Streptococcus mutans [TaxId:210007] [189554] (1 PDB entry)
71. Species Streptococcus pyogenes [TaxId:198466] [193090] (2 PDB entries)
72. Species Streptomyces coelicolor [TaxId:100226] [419900] (2 PDB entries)
73. Species Streptomyces coelicolor [TaxId:1902] [196367] (2 PDB entries)
74. Species Sulfolobus solfataricus [TaxId:273057] [228633] (1 PDB entry)
75. Species Sulfolobus tokodaii [TaxId:111955] [230692] (3 PDB entries)
76. Species Sulfolobus tokodaii [TaxId:273063] [230698] (7 PDB entries)
77. Species Thalictrum flavum [TaxId:150095] [318179] (8 PDB entries)
78. Species Thermoanaerobacter ethanolicus [TaxId:509192] [419885] (3 PDB entries)
79. Species Thermoplasma acidophilum [TaxId:2303] [196079] (1 PDB entry)
80. Species Thermoplasma volcanium [TaxId:50339] [188518] (1 PDB entry)
81. Species Thermotoga maritima [TaxId:2336] [225980] (1 PDB entry)
82. Species Thermotoga maritima [TaxId:243274] [360039] (3 PDB entries)
83. Species Thermus thermophilus [TaxId:262724] [346169] (1 PDB entry)
84. Species Vibrio cholerae [TaxId:243277] [256837] (2 PDB entries)
85. Species Vibrio cholerae [TaxId:666] [225592] (1 PDB entry)
86. Species Vibrio vulnificus [TaxId:216895] [267843] (2 PDB entries)
87. Species Xanthomonas campestris [TaxId:314565] [404953] (2 PDB entries)
88. Species Xanthomonas campestris [TaxId:339] [230729] (1 PDB entry)
89. Species Xanthomonas campestris [TaxId:340] [225797] (1 PDB entry)
90. Species Xylella fastidiosa [TaxId:2371] [267870] (2 PDB entries)
91. Species Yersinia pestis [TaxId:214092] [353904] (1 PDB entry)
92. Species Streptococcus agalactiae [TaxId:211110] [421395] (3 PDB entries)

More info for Family a.4.5.0: automated matches

Timeline for Family a.4.5.0: automated matches:

Family a.4.5.0: automated matches first appeared in SCOPe 2.01
Family a.4.5.0: automated matches appears in SCOPe 2.07