SCOPe 2.07: Family c.67.1.0: automated matches

Lineage for Family c.67.1.0: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)
Family c.67.1.0: automated matches [191328] (1 protein)
not a true family

Protein:

automated matches [190151] (160 species)
not a true protein
1. Species Acinetobacter baumannii [TaxId:575584] [385676] (1 PDB entry)
2. Species Actinomadura melliaura [TaxId:360723] [269170] (2 PDB entries)
3. Species Aeromonas jandaei [TaxId:650] [258594] (2 PDB entries)
4. Species Aeropyrum pernix [TaxId:272557] [188211] (1 PDB entry)
5. Species Aeropyrum pernix [TaxId:56636] [188642] (2 PDB entries)
6. Species African malaria mosquito (Anopheles gambiae) [TaxId:7165] [187029] (2 PDB entries)
7. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [196443] (1 PDB entry)
8. Species Aquifex aeolicus [TaxId:224324] [230705] (1 PDB entry)
9. Species Archaeoglobus fulgidus [TaxId:224325] [196899] (4 PDB entries)
10. Species Arthrobacter aurescens [TaxId:290340] [234095] (2 PDB entries)
11. Species Arthrobacter sp. [TaxId:1667] [319965] (2 PDB entries)
12. Species Bacillus anthracis [TaxId:261594] [189194] (4 PDB entries)
13. Species Bacillus cereus [TaxId:222523] [225780] (1 PDB entry)
14. Species Bacillus circulans [TaxId:1397] [187516] (3 PDB entries)
15. Species Bacillus megaterium [TaxId:1404] [319950] (2 PDB entries)
16. Species Bacillus subtilis [TaxId:1423] [188928] (4 PDB entries)
17. Species Bacillus subtilis [TaxId:224308] [320074] (12 PDB entries)
18. Species Bifidobacterium kashiwanohense [TaxId:1447716] [378713] (1 PDB entry)
19. Species Brucella abortus [TaxId:359391] [257681] (1 PDB entry)
20. Species Brucella suis [TaxId:520488] [260277] (1 PDB entry)
21. Species Burkholderia cenocepacia [TaxId:216591] [226753] (1 PDB entry)
22. Species Burkholderia cenocepacia [TaxId:985076] [260283] (1 PDB entry)
23. Species Burkholderia multivorans [TaxId:395019] [334355] (1 PDB entry)
24. Species Burkholderia pseudomallei [TaxId:272560] [226390] (1 PDB entry)
25. Species Burkholderia pseudomallei [TaxId:28450] [225995] (3 PDB entries)
26. Species Burkholderia xenovorans [TaxId:266265] [316123] (1 PDB entry)
27. Species Campylobacter jejuni [TaxId:192222] [196590] (3 PDB entries)
28. Species Campylobacter jejuni [TaxId:197] [189298] (7 PDB entries)
29. Species Catharanthus roseus [TaxId:4058] [357716] (1 PDB entry)
30. Species Caulobacter crescentus [TaxId:190650] [188372] (3 PDB entries)
31. Species Chlamydia trachomatis [TaxId:813] [311270] (2 PDB entries)
32. Species Chromobacterium violaceum [TaxId:243365] [371613] (1 PDB entry)
33. Species Chromobacterium violaceum [TaxId:536] [234042] (8 PDB entries)
34. Species Chromohalobacter salexigens [TaxId:290398] [382132] (1 PDB entry)
35. Species Clostridium acetobutylicum [TaxId:1488] [188774] (1 PDB entry)
36. Species Clostridium difficile [TaxId:272563] [195958] (2 PDB entries)
37. Species Clostridium sporogenes [TaxId:1509] [280343] (1 PDB entry)
38. Species Corynebacterium diphtheriae [TaxId:1717] [232157] (1 PDB entry)
39. Species Corynebacterium glutamicum [231893] (3 PDB entries)
40. Species Corynebacterium glutamicum [TaxId:196627] [330546] (2 PDB entries)
41. Species Coxiella burnetii [TaxId:777] [226271] (1 PDB entry)
42. Species Cupriavidus necator [TaxId:106590] [403018] (4 PDB entries)
43. Species Cytophaga hutchinsonii [TaxId:269798] [267833] (1 PDB entry)
44. Species Drosophila melanogaster [TaxId:7227] [367824] (1 PDB entry)
45. Species Elizabethkingia anophelis [TaxId:1117645] [333946] (1 PDB entry)
46. Species Elizabethkingia anophelis [TaxId:1338011] [334363] (1 PDB entry)
47. Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [311267] (8 PDB entries)
48. Species Entamoeba histolytica [TaxId:885315] [359630] (1 PDB entry)
49. Species Erwinia tasmaniensis [TaxId:465817] [360026] (1 PDB entry)
50. Species Escherichia coli K-12 [TaxId:83333] [226746] (6 PDB entries)
51. Species Escherichia coli [TaxId:1182686] [267992] (1 PDB entry)
52. Species Escherichia coli [TaxId:511693] [234051] (4 PDB entries)
53. Species Escherichia coli [TaxId:562] [187268] (1 PDB entry)
54. Species Escherichia coli [TaxId:83333] [257757] (5 PDB entries)
55. Species Escherichia coli [TaxId:945433] [267966] (3 PDB entries)
56. Species Eubacterium rectale [225558] (1 PDB entry)
57. Species Fervidobacterium islandicum [TaxId:2423] [375281] (2 PDB entries)
58. Species Fusobacterium nucleatum [TaxId:190304] [383585] (2 PDB entries)
59. Species Geobacter metallireducens [TaxId:269799] [225685] (1 PDB entry)
60. Species Giardia lamblia [TaxId:184922] [255966] (1 PDB entry)
61. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [267874] (1 PDB entry)
62. Species Halomonas elongata [TaxId:768066] [368542] (1 PDB entry)
63. Species Helicobacter canadensis [TaxId:537970] [405729] (1 PDB entry)
64. Species Helicobacter pylori [TaxId:563041] [333652] (1 PDB entry)
65. Species Helicobacter pylori [TaxId:85962] [188666] (10 PDB entries)
66. Species Human (Homo sapiens) [TaxId:9606] [188446] (29 PDB entries)
67. Species Hydrogenimonas thermophila [TaxId:223786] [368474] (4 PDB entries)
68. Species Klebsiella pneumoniae [TaxId:1379688] [384493] (1 PDB entry)
69. Species Klebsiella pneumoniae [TaxId:272620] [341777] (1 PDB entry)
70. Species Komagataella phaffii [TaxId:981350] [349068] (1 PDB entry)
71. Species Lactobacillus brevis [TaxId:1580] [337157] (1 PDB entry)
72. Species Lactobacillus buchneri [TaxId:1581] [316142] (5 PDB entries)
73. Species Lactobacillus delbrueckii [TaxId:321956] [188555] (1 PDB entry)
74. Species Legionella pneumophila [TaxId:272624] [350056] (4 PDB entries)
75. Species Leishmania infantum [TaxId:5671] [256314] (1 PDB entry)
76. Species Leishmania major [TaxId:347515] [226494] (1 PDB entry)
77. Species Listeria innocua [TaxId:1642] [188713] (1 PDB entry)
78. Species Mesorhizobium loti [TaxId:266835] [196595] (1 PDB entry)
79. Species Methanocaldococcus jannaschii [TaxId:243232] [258609] (3 PDB entries)
80. Species Methanococcus jannaschii [TaxId:2190] [188462] (1 PDB entry)
81. Species Micromonospora echinospora [TaxId:1877] [257603] (4 PDB entries)
82. Species Mouse (Mus musculus) [TaxId:10090] [188700] (8 PDB entries)
83. Species Mycobacterium abscessus [TaxId:561007] [226405] (1 PDB entry)
84. Species Mycobacterium bovis [TaxId:233413] [334928] (3 PDB entries)
85. Species Mycobacterium marinum [TaxId:216594] [226100] (2 PDB entries)
86. Species Mycobacterium microti [TaxId:1806] [368536] (1 PDB entry)
87. Species Mycobacterium smegmatis [TaxId:246196] [226015] (2 PDB entries)
88. Species Mycobacterium tuberculosis [TaxId:1773] [225404] (30 PDB entries)
89. Species Mycobacterium tuberculosis [TaxId:83331] [269439] (1 PDB entry)
90. Species Mycobacterium tuberculosis [TaxId:83332] [187938] (11 PDB entries)
91. Species Mycobacterium ulcerans [TaxId:362242] [189655] (2 PDB entries)
92. Species Neisseria meningitidis [TaxId:122587] [196533] (1 PDB entry)
93. Species Ochrobactrum anthropi [TaxId:439375] [334452] (2 PDB entries)
94. Species Ochrobactrum anthropi [TaxId:529] [366776] (1 PDB entry)
95. Species Oryza sativa [TaxId:39947] [389277] (3 PDB entries)
96. Species Papaver somniferum [TaxId:3469] [357733] (1 PDB entry)
97. Species Paraburkholderia phymatum [TaxId:391038] [368454] (1 PDB entry)
98. Species Paracoccus denitrificans [TaxId:318586] [224906] (1 PDB entry)
99. Species Plasmodium falciparum [TaxId:36329] [189486] (2 PDB entries)
100. Species Plasmodium vivax [TaxId:126793] [261543] (24 PDB entries)
101. Species Porphyromonas gingivalis [TaxId:837] [225603] (1 PDB entry)
102. Species Pseudomonas aeruginosa [TaxId:287] [267859] (5 PDB entries)
103. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [225932] (10 PDB entries)
104. Species Pseudomonas fluorescens [TaxId:294] [376870] (1 PDB entry)
105. Species Pseudomonas putida [TaxId:303] [339955] (2 PDB entries)
106. Species Pseudomonas sp [TaxId:306] [367386] (5 PDB entries)
107. Species Pseudomonas sp. [TaxId:306] [315480] (7 PDB entries)
108. Species Pseudomonas sp. [TaxId:95619] [328210] (1 PDB entry)
109. Species Pseudomonas stutzeri [TaxId:316] [267772] (3 PDB entries)
110. Species Psychrobacter cryohalolentis [TaxId:335284] [358000] (1 PDB entry)
111. Species Psychrobacter sp. [TaxId:408968] [269853] (3 PDB entries)
112. Species Pyrococcus horikoshii OT3 [TaxId:70601] [225184] (6 PDB entries)
113. Species Ralstonia eutropha [TaxId:264198] [188659] (1 PDB entry)
114. Species Rhizobium meliloti [TaxId:266834] [260118] (3 PDB entries)
115. Species Rhodiola rosea [TaxId:203015] [357906] (1 PDB entry)
116. Species Rhodobacter sphaeroides [TaxId:272943] [255877] (1 PDB entry)
117. Species Rickettsia rickettsii [TaxId:392021] [234926] (1 PDB entry)
118. Species Salmonella enterica [TaxId:90371] [226773] (1 PDB entry)
119. Species Salmonella typhimurium [TaxId:99287] [255544] (9 PDB entries)
120. Species Schizosaccharomyces pombe [TaxId:284812] [373969] (1 PDB entry)
121. Species Silicibacter pomeroyi [TaxId:246200] [196577] (1 PDB entry)
122. Species Silicibacter pomeroyi [TaxId:89184] [232488] (1 PDB entry)
123. Species Silicibacter sp. [TaxId:292414] [232155] (1 PDB entry)
124. Species Sphingobacterium multivorum [TaxId:28454] [225699] (1 PDB entry)
125. Species Sphingopyxis macrogoltabida [TaxId:33050] [373362] (2 PDB entries)
126. Species Staphylococcus aureus [TaxId:1280] [225192] (1 PDB entry)
127. Species Staphylococcus aureus [TaxId:158878] [382577] (2 PDB entries)
128. Species Staphylococcus hominis [TaxId:1290] [381817] (2 PDB entries)
129. Species Stenotrophomonas maltophilia [TaxId:391008] [385326] (4 PDB entries)
130. Species Stenotrophomonas maltophilia [TaxId:522373] [383489] (3 PDB entries)
131. Species Streptoalloteichus hindustanus [TaxId:2017] [329318] (1 PDB entry)
132. Species Streptococcus anginosus [TaxId:1328] [195061] (3 PDB entries)
133. Species Streptococcus mutans [TaxId:210007] [255923] (2 PDB entries)
134. Species Streptococcus pneumoniae [TaxId:170187] [351651] (3 PDB entries)
135. Species Streptomyces kaniharaensis [TaxId:212423] [379104] (4 PDB entries)
136. Species Streptomyces lividans [TaxId:1916] [267901] (1 PDB entry)
137. Species Streptomyces pactum [TaxId:68249] [278255] (2 PDB entries)
138. Species Streptomyces venezuelae [TaxId:54571] [255527] (2 PDB entries)
139. Species Synechococcus sp. [311291] (1 PDB entry)
140. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [267816] (20 PDB entries)
141. Species Thermococcus litoralis [TaxId:2265] [188474] (1 PDB entry)
142. Species Thermococcus onnurineus [TaxId:523850] [335326] (4 PDB entries)
143. Species Thermomicrobium roseum [TaxId:309801] [369129] (1 PDB entry)
144. Species Thermotoga maritima [TaxId:243274] [230690] (4 PDB entries)
145. Species Thermus thermophilus HB8 [TaxId:300852] [187350] (2 PDB entries)
146. Species Toxoplasma gondii [TaxId:508771] [256372] (8 PDB entries)
147. Species Trichomonas vaginalis [TaxId:5722] [324159] (1 PDB entry)
148. Species Trypanosoma brucei [TaxId:999953] [260109] (1 PDB entry)
149. Species Trypanosoma cruzi [TaxId:353153] [361057] (1 PDB entry)
150. Species Trypanosome (Leishmania mexicana) [TaxId:5665] [276755] (1 PDB entry)
151. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [226378] (1 PDB entry)
152. Species Verrucomicrobium spinosum [TaxId:2736] [388571] (1 PDB entry)
153. Species Vibrio cyclitrophicus [TaxId:47951] [384017] (1 PDB entry)
154. Species Vibrio fluvialis [TaxId:676] [233050] (3 PDB entries)
155. Species Virgibacillus pantothenticus [TaxId:1473] [361135] (1 PDB entry)
156. Species Wolinella succinogenes [TaxId:844] [267881] (1 PDB entry)
157. Species Xanthomonas oryzae [TaxId:291331] [189393] (10 PDB entries)
158. Species Xanthomonas oryzae [TaxId:64187] [188962] (1 PDB entry)
159. Species Yellow fever mosquito (Aedes aegypti) [TaxId:7159] [186876] (5 PDB entries)
160. Species Yersinia pestis [TaxId:386656] [195669] (1 PDB entry)

More info for Family c.67.1.0: automated matches

Timeline for Family c.67.1.0: automated matches:

Family c.67.1.0: automated matches first appeared in SCOPe 2.01
Family c.67.1.0: automated matches appears in SCOPe 2.06
Family c.67.1.0: automated matches appears in the current release, SCOPe 2.08