SCOPe 2.08: Family c.47.1.0: automated matches

Lineage for Family c.47.1.0: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
Superfamily c.47.1: Thioredoxin-like [52833] (24 families)
Family c.47.1.0: automated matches [191312] (1 protein)
not a true family

Protein:

automated matches [190056] (195 species)
not a true protein
1. Species Acinetobacter baumannii [TaxId:509173] [257404] (1 PDB entry)
2. Species Aeropyrum pernix [TaxId:272557] [225140] (1 PDB entry)
3. Species African malaria mosquito (Anopheles gambiae) [TaxId:7165] [225347] (4 PDB entries)
4. Species Akkermansia muciniphila [TaxId:239935] [380639] (1 PDB entry)
5. Species Alkaliphilus oremlandii [TaxId:350688] [260042] (5 PDB entries)
6. Species Alopecurus myosuroides [TaxId:81473] [381852] (1 PDB entry)
7. Species Alvinella pompejana [TaxId:6376] [189859] (1 PDB entry)
8. Species Anaeromyxobacter dehalogenans [TaxId:290397] [226674] (1 PDB entry)
9. Species Anaeromyxobacter dehalogenans [TaxId:455488] [226576] (3 PDB entries)
10. Species Anopheles dirus [TaxId:7168] [226778] (2 PDB entries)
11. Species Anopheles funestus [TaxId:62324] [236279] (2 PDB entries)
12. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [194451] (2 PDB entries)
13. Species Anticarsia gemmatalis [TaxId:129554] [321688] (1 PDB entry)
14. Species Aquifex aeolicus [TaxId:224324] [188265] (3 PDB entries)
15. Species Aquifex aeolicus [TaxId:63363] [225093] (1 PDB entry)
16. Species Archaeoglobus fulgidus [TaxId:2234] [419851] (1 PDB entry)
17. Species Archaeoglobus fulgidus [TaxId:224325] [272006] (1 PDB entry)
18. Species Azotobacter vinelandii [TaxId:354] [321679] (1 PDB entry)
19. Species Bacillus cereus [TaxId:1396] [193273] (2 PDB entries)
20. Species Bacillus subtilis [TaxId:1423] [188752] (4 PDB entries)
21. Species Bacteroides fragilis [TaxId:272559] [188839] (3 PDB entries)
22. Species Bacteroides fragilis [TaxId:817] [255871] (2 PDB entries)
23. Species Bacteroides sp. [TaxId:457394] [255455] (1 PDB entry)
24. Species Bacteroides thetaiotaomicron [TaxId:226186] [255458] (1 PDB entry)
25. Species Bacteroides thetaiotaomicron [TaxId:818] [232191] (2 PDB entries)
26. Species Bacteroides vulgatus [TaxId:435590] [194549] (5 PDB entries)
27. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187694] (14 PDB entries)
28. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [195631] (7 PDB entries)
29. Species Barley (Hordeum vulgare) [TaxId:4513] [187880] (1 PDB entry)
30. Species Bartonella henselae [TaxId:283166] [255358] (1 PDB entry)
31. Species Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId:5306] [226685] (10 PDB entries)
32. Species Blattella germanica [TaxId:6973] [270993] (1 PDB entry)
33. Species Blomia tropicalis [TaxId:40697] [270994] (1 PDB entry)
34. Species Blood fluke (Schistosoma haematobium) [TaxId:6185] [225080] (4 PDB entries)
35. Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [189028] (9 PDB entries)
36. Species Bordetella parapertussis [TaxId:519] [196569] (1 PDB entry)
37. Species Bradyrhizobium diazoefficiens [TaxId:224911] [260057] (3 PDB entries)
38. Species Bradyrhizobium sp. [TaxId:288000] [227810] (2 PDB entries)
39. Species Brucella abortus [TaxId:235] [255366] (1 PDB entry)
40. Species Brucella melitensis [TaxId:224914] [316417] (1 PDB entry)
41. Species Brucella melitensis [TaxId:29459] [255346] (2 PDB entries)
42. Species Burkholderia ambifaria [TaxId:339670] [419907] (1 PDB entry)
43. Species Burkholderia ambifaria [TaxId:398577] [311498] (1 PDB entry)
44. Species Burkholderia cenocepacia [TaxId:216591] [195045] (2 PDB entries)
45. Species Burkholderia graminis [TaxId:396598] [227806] (2 PDB entries)
46. Species Burkholderia pseudomallei [TaxId:272560] [226749] (1 PDB entry)
47. Species Burkholderia thailandensis [TaxId:271848] [379159] (1 PDB entry)
48. Species Burkholderia xenovorans [TaxId:266265] [225115] (2 PDB entries)
49. Species Canis lupus [TaxId:9615] [254889] (1 PDB entry)
50. Species Castor bean (Ricinus communis) [TaxId:3988] [226601] (1 PDB entry)
51. Species Caulobacter crescentus [TaxId:565050] [350377] (1 PDB entry)
52. Species Cenchrus americanus [TaxId:4543] [316957] (1 PDB entry)
53. Species Chicken (Gallus gallus) [TaxId:9031] [225005] (4 PDB entries)
54. Species Chlorella sorokiniana [TaxId:3076] [229236] (2 PDB entries)
55. Species Chlorobaculum tepidum [TaxId:1097] [189480] (1 PDB entry)
56. Species Chlorobium tepidum [TaxId:194439] [232284] (1 PDB entry)
57. Species Chromobacterium violaceum [TaxId:536] [255907] (1 PDB entry)
58. Species Clonorchis sinensis [TaxId:79923] [225957] (3 PDB entries)
59. Species Clostridium acetobutylicum [TaxId:272562] [361111] (2 PDB entries)
60. Species Cow (Bos taurus) [TaxId:9913] [269643] (2 PDB entries)
61. Species Cryptococcus neoformans [TaxId:235443] [335068] (1 PDB entry)
62. Species Cytophaga hutchinsonii [TaxId:269798] [232457] (1 PDB entry)
63. Species Desulfitobacterium hafniense [TaxId:272564] [188874] (1 PDB entry)
64. Species Desulfovibrio vulgaris [TaxId:881] [420089] (1 PDB entry)
65. Species Drosophila mojavensis [TaxId:7230] [226515] (1 PDB entry)
66. Species Ectromelia virus [TaxId:265874] [187832] (2 PDB entries)
67. Species Edwardsiella tarda [TaxId:498217] [365696] (2 PDB entries)
68. Species Elizabethkingia anophelis [TaxId:1338011] [375924] (1 PDB entry)
69. Species Entamoeba histolytica [TaxId:885315] [272653] (1 PDB entry)
70. Species Enterococcus faecalis [TaxId:226185] [348733] (1 PDB entry)
71. Species Escherichia coli K-12 [TaxId:83333] [232346] (2 PDB entries)
72. Species Escherichia coli [TaxId:562] [188952] (3 PDB entries)
73. Species Escherichia coli [TaxId:83333] [256896] (3 PDB entries)
74. Species Fasciola hepatica [TaxId:6192] [188507] (4 PDB entries)
75. Species Francisella tularensis [TaxId:177416] [232833] (3 PDB entries)
76. Species Francisella tularensis [TaxId:263] [337919] (2 PDB entries)
77. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [225708] (18 PDB entries)
78. Species Geobacillus kaustophilus [TaxId:235909] [267814] (1 PDB entry)
79. Species Geobacter metallireducens [TaxId:269799] [232459] (2 PDB entries)
80. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [348632] (10 PDB entries)
81. Species Haemonchus contortus [TaxId:6289] [226002] (1 PDB entry)
82. Species Haemophilus influenzae [TaxId:727] [255943] (1 PDB entry)
83. Species Halobacterium salinarum [TaxId:64091] [378942] (1 PDB entry)
84. Species Helicobacter pylori [TaxId:210] [186917] (2 PDB entries)
85. Species Hordeum vulgare [TaxId:112509] [188423] (3 PDB entries)
86. Species Horse (Equus caballus) [TaxId:9796] [396656] (2 PDB entries)
87. Species House fly (Musca domestica) [TaxId:7370] [226605] (2 PDB entries)
88. Species House-dust mite (Dermatophagoides pteronyssinus) [TaxId:6956] [270996] (1 PDB entry)
89. Species Human (Homo sapiens) [TaxId:9606] [188013] (113 PDB entries)
90. Species Hypocrea jecorina [TaxId:431241] [397866] (1 PDB entry)
91. Species Idiomarina loihiensis [TaxId:283942] [256231] (1 PDB entry)
92. Species Klebsiella pneumoniae [TaxId:573] [354497] (1 PDB entry)
93. Species Legionella pneumophila [TaxId:272624] [196919] (2 PDB entries)
94. Species Legionella pneumophila [TaxId:297246] [197273] (1 PDB entry)
95. Species Leishmania infantum [TaxId:5671] [365025] (1 PDB entry)
96. Species Lodderomyces elongisporus [TaxId:379508] [234906] (1 PDB entry)
97. Species Malassezia sympodialis [TaxId:76777] [187890] (1 PDB entry)
98. Species Mangifera indica [TaxId:29780] [329178] (3 PDB entries)
99. Species Mannheimia haemolytica [TaxId:272629] [226567] (2 PDB entries)
100. Species Methanosarcina mazei [TaxId:2209] [255874] (1 PDB entry)
101. Species Methylococcus capsulatus [TaxId:243233] [226241] (2 PDB entries)
102. Species Mouse (Mus musculus) [TaxId:10090] [225046] (14 PDB entries)
103. Species Mycobacterium abscessus [TaxId:561007] [237466] (1 PDB entry)
104. Species Mycobacterium avium [TaxId:1160712] [261332] (1 PDB entry)
105. Species Mycobacterium smegmatis [TaxId:1772] [335269] (1 PDB entry)
106. Species Mycobacterium thermoresistibile [TaxId:1078020] [340365] (1 PDB entry)
107. Species Mycobacterium tuberculosis [TaxId:1773] [187835] (4 PDB entries)
108. Species Mycobacterium tuberculosis [TaxId:419947] [189518] (1 PDB entry)
109. Species Mycobacterium tuberculosis [TaxId:83332] [189521] (3 PDB entries)
110. Species Necator americanus [TaxId:51031] [224893] (6 PDB entries)
111. Species Neisseria gonorrhoeae [TaxId:485] [234683] (1 PDB entry)
112. Species Neisseria meningitidis [TaxId:122586] [196549] (3 PDB entries)
113. Species Neisseria meningitidis [TaxId:491] [196523] (3 PDB entries)
114. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [224979] (2 PDB entries)
115. Species Neosartorya fumigata [TaxId:330879] [322976] (2 PDB entries)
116. Species Nilaparvata lugens [TaxId:108931] [268085] (2 PDB entries)
117. Species Octopus vulgaris [TaxId:6645] [320349] (1 PDB entry)
118. Species Onchocerca volvulus [TaxId:6282] [267780] (1 PDB entry)
119. Species Oreochromis mossambicus [TaxId:8127] [348766] (1 PDB entry)
120. Species Oryza sativa [TaxId:39947] [346305] (4 PDB entries)
121. Species Pacific white shrimp (Litopenaeus vannamei) [TaxId:6689] [323880] (1 PDB entry)
122. Species Pennisetum americanum [TaxId:4543] [317014] (1 PDB entry)
123. Species Pig roundworm (Ascaris suum) [TaxId:6253] [271024] (1 PDB entry)
124. Species Plasmodium falciparum [195607] (1 PDB entry)
125. Species Plasmodium falciparum [TaxId:36329] [228276] (25 PDB entries)
126. Species Plasmodium vivax [TaxId:126793] [225142] (2 PDB entries)
127. Species Plasmodium vivax [TaxId:5855] [225085] (1 PDB entry)
128. Species Plasmodium yoelii [311205] (1 PDB entry)
129. Species Plasmodium yoelii [TaxId:73239] [324996] (1 PDB entry)
130. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [226373] (1 PDB entry)
131. Species Populus tremula [TaxId:47664] [188794] (10 PDB entries)
132. Species Populus trichocarpa [TaxId:3695] [187360] (4 PDB entries)
133. Species Porphyromonas gingivalis [TaxId:242619] [255487] (1 PDB entry)
134. Species Pseudomonas aeruginosa [TaxId:208963] [385481] (1 PDB entry)
135. Species Pseudomonas aeruginosa [TaxId:287] [267848] (3 PDB entries)
136. Species Pseudomonas aeruginosa [TaxId:388272] [226354] (3 PDB entries)
137. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [189148] (7 PDB entries)
138. Species Pseudomonas fluorescens [TaxId:220664] [255947] (2 PDB entries)
139. Species Pseudomonas protegens [TaxId:220664] [226562] (1 PDB entry)
140. Species Pseudomonas putida [TaxId:160488] [255962] (1 PDB entry)
141. Species Pseudomonas putida [TaxId:351746] [228879] (1 PDB entry)
142. Species Ralstonia sp. [TaxId:70356] [225492] (2 PDB entries)
143. Species Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [226257] (1 PDB entry)
144. Species Rhodopseudomonas palustris [TaxId:1076] [267854] (1 PDB entry)
145. Species Rickettsia prowazekii [TaxId:272947] [365208] (1 PDB entry)
146. Species Saccharomyces cerevisiae [TaxId:307796] [356158] (1 PDB entry)
147. Species Salix babylonica [TaxId:75706] [420114] (8 PDB entries)
148. Species Salmonella enterica [TaxId:216597] [189263] (2 PDB entries)
149. Species Salmonella enterica [TaxId:90370] [346306] (1 PDB entry)
150. Species Salmonella enterica [TaxId:99287] [225742] (1 PDB entry)
151. Species Scaptomyza nigrita [TaxId:928823] [229396] (1 PDB entry)
152. Species Schistosoma japonicum [TaxId:6182] [225614] (9 PDB entries)
153. Species Shigella flexneri [TaxId:198215] [226692] (1 PDB entry)
154. Species Silicibacter phage [TaxId:490912] [194069] (1 PDB entry)
155. Species Silkworm (Bombyx mori) [TaxId:7091] [226183] (9 PDB entries)
156. Species Sinorhizobium meliloti [TaxId:266834] [256114] (1 PDB entry)
157. Species Soybean (Glycine max) [TaxId:3847] [225579] (5 PDB entries)
158. Species Sphingobium chungbukense [TaxId:56193] [383332] (1 PDB entry)
159. Species Staphylococcus aureus [TaxId:93061] [189763] (2 PDB entries)
160. Species Staphylococcus aureus [TaxId:93062] [255479] (1 PDB entry)
161. Species Streptococcus gordonii [TaxId:467705] [329931] (1 PDB entry)
162. Species Streptococcus mutans [TaxId:210007] [188777] (1 PDB entry)
163. Species Streptococcus pneumoniae [TaxId:170187] [255707] (3 PDB entries)
164. Species Streptomyces avermitilis [TaxId:33903] [188516] (1 PDB entry)
165. Species Streptomyces coelicolor [TaxId:100226] [188020] (1 PDB entry)
166. Species Sulfolobus solfataricus [TaxId:2287] [188853] (4 PDB entries)
167. Species Sulfolobus tokodaii [TaxId:111955] [188207] (1 PDB entry)
168. Species Sulfolobus tokodaii [TaxId:273063] [193434] (2 PDB entries)
169. Species Synechocystis sp. PCC 6803 [TaxId:1148] [189864] (5 PDB entries)
170. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [196344] (34 PDB entries)
171. Species Thermus thermophilus HB8 [TaxId:300852] [188264] (2 PDB entries)
172. Species Thermus thermophilus [TaxId:262724] [261603] (2 PDB entries)
173. Species Thermus thermophilus [TaxId:274] [187570] (1 PDB entry)
174. Species Trypanosoma cruzi [TaxId:5693] [188882] (2 PDB entries)
175. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [225474] (6 PDB entries)
176. Species Vibrio cholerae [TaxId:666] [225554] (1 PDB entry)
177. Species Vibrio fischeri [TaxId:312309] [188754] (1 PDB entry)
178. Species Vibrio vulnificus [TaxId:914127] [334439] (3 PDB entries)
179. Species Western balsam poplar (Populus trichocarpa) [TaxId:3694] [186776] (13 PDB entries)
180. Species Wheat (Triticum aestivum) [TaxId:4565] [366312] (1 PDB entry)
181. Species Winged tobacco (Nicotiana alata) [TaxId:4087] [393155] (1 PDB entry)
182. Species Wuchereria bancrofti [TaxId:6293] [226429] (1 PDB entry)
183. Species Xanthobacter autotrophicus [TaxId:78245] [267947] (1 PDB entry)
184. Species Xenorhabdus nematophila [TaxId:406817] [226705] (1 PDB entry)
185. Species Xylella fastidiosa [TaxId:160492] [231546] (1 PDB entry)
186. Species Xylella fastidiosa [TaxId:2371] [196083] (2 PDB entries)
187. Species Yellow fever mosquito (Aedes aegypti) [TaxId:7159] [329969] (2 PDB entries)
188. Species Yersinia pestis [TaxId:214092] [226115] (1 PDB entry)
189. Species Yersinia pestis [TaxId:632] [226438] (3 PDB entries)
190. Species Yersinia pseudotuberculosis [TaxId:502800] [255688] (4 PDB entries)
191. Species Yersinia pseudotuberculosis [TaxId:633] [255701] (1 PDB entry)
192. Species Zebrafish (Danio rerio) [TaxId:7955] [256119] (1 PDB entry)
193. Species Plasmodium falciparum [TaxId:5833] [421149] (1 PDB entry)
194. Species Campylobacter jejuni [TaxId:197] [422127] (1 PDB entry)
195. Species Camelus dromedarius [TaxId:9838] [422347] (1 PDB entry)

More info for Family c.47.1.0: automated matches

Timeline for Family c.47.1.0: automated matches:

Family c.47.1.0: automated matches first appeared in SCOPe 2.01
Family c.47.1.0: automated matches appears in SCOPe 2.07