SCOPe 2.03: Family c.94.1.0: automated matches

Lineage for Family c.94.1.0: automated matches

Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.0: automated matches [191309] (1 protein)
not a true family

Protein:

automated matches [190039] (57 species)
not a true protein
1. Species Actinomyces odontolyticus [TaxId:411466] [189886] (1 PDB entry)
2. Species Adineta vaga [TaxId:104782] [226596] (6 PDB entries)
3. Species Alicyclobacillus acidocaldarius [TaxId:521098] [228890] (1 PDB entry)
4. Species Bacillus megaterium [TaxId:1404] [238213] (1 PDB entry)
5. Species Bacillus subtilis [TaxId:1423] [187940] (2 PDB entries)
6. Species Bacillus subtilis [TaxId:224308] [194551] (1 PDB entry)
7. Species Bacillus subtilis [TaxId:535025] [189693] (1 PDB entry)
8. Species Borrelia burgdorferi [TaxId:224326] [236221] (1 PDB entry)
9. Species Burkholderia pseudomallei [TaxId:320372] [226389] (1 PDB entry)
10. Species Chlamydia trachomatis [TaxId:813] [188892] (1 PDB entry)
11. Species Chlamydophila pneumoniae [TaxId:83558] [189367] (1 PDB entry)
12. Species Clostridium difficile [TaxId:272563] [197037] (2 PDB entries)
13. Species Cow (Bos taurus) [TaxId:9913] [225036] (48 PDB entries)
14. Species Coxiella burnetii [TaxId:777] [189739] (2 PDB entries)
15. Species Ehrlichia chaffeensis [TaxId:205920] [226384] (1 PDB entry)
16. Species Enterococcus faecalis [TaxId:226185] [195543] (3 PDB entries)
17. Species Escherichia coli [TaxId:562] [189696] (1 PDB entry)
18. Species Geobacillus stearothermophilus [TaxId:1422] [225397] (3 PDB entries)
19. Species Geobacter sulfurreducens [TaxId:35554] [188938] (1 PDB entry)
20. Species Haemophilus parasuis [TaxId:456298] [189829] (1 PDB entry)
21. Species Haemophilus parasuis [TaxId:557723] [193812] (1 PDB entry)
22. Species Human (Homo sapiens) [TaxId:9606] [193730] (12 PDB entries)
23. Species Lactobacillus brevis [TaxId:387344] [195626] (1 PDB entry)
24. Species Lactococcus lactis [TaxId:272623] [227880] (4 PDB entries)
25. Species Legionella pneumophila [TaxId:272624] [189169] (1 PDB entry)
26. Species Listeria monocytogenes [TaxId:169963] [193523] (2 PDB entries)
27. Species Methanobacterium thermoautotrophicum [TaxId:187420] [225549] (1 PDB entry)
28. Species Neisseria meningitidis [TaxId:487] [232610] (1 PDB entry)
29. Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (69 PDB entries)
30. Species Nostoc punctiforme [TaxId:63737] [188325] (1 PDB entry)
31. Species Porphyromonas gingivalis [TaxId:837] [225908] (2 PDB entries)
32. Species Pseudomonas aeruginosa [TaxId:208964] [196922] (1 PDB entry)
33. Species Pseudomonas aeruginosa [TaxId:287] [195692] (2 PDB entries)
34. Species Pyrococcus horikoshii [TaxId:53953] [188797] (1 PDB entry)
35. Species Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [188303] (2 PDB entries)
36. Species Ruminococcus gnavus [TaxId:411470] [194126] (1 PDB entry)
37. Species Salmonella typhimurium [TaxId:90371] [189953] (1 PDB entry)
38. Species Silicibacter pomeroyi [TaxId:89184] [189007] (1 PDB entry)
39. Species Staphylococcus aureus [TaxId:158878] [189432] (1 PDB entry)
40. Species Streptococcus mutans [TaxId:1309] [224911] (1 PDB entry)
41. Species Streptococcus pneumoniae [TaxId:170187] [226722] (1 PDB entry)
42. Species Streptococcus pneumoniae [TaxId:525381] [226370] (1 PDB entry)
43. Species Streptococcus pneumoniae [TaxId:637987] [193477] (5 PDB entries)
44. Species Streptococcus thermophilus [TaxId:264199] [232515] (1 PDB entry)
45. Species Synechocystis sp. PCC 6803 [TaxId:1148] [187344] (3 PDB entries)
46. Species Synechocystis sp. [TaxId:1148] [225435] (2 PDB entries)
47. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [226598] (1 PDB entry)
48. Species Thermoactinomyces vulgaris [TaxId:2026] [193732] (4 PDB entries)
49. Species Thermotoga maritima [TaxId:243274] [187721] (3 PDB entries)
50. Species Thermus thermophilus [TaxId:262724] [193882] (2 PDB entries)
51. Species Thermus thermophilus [TaxId:300852] [226637] (4 PDB entries)
52. Species Treponema pallidum [TaxId:243276] [225334] (1 PDB entry)
53. Species Vibrio parahaemolyticus [TaxId:670] [233133] (1 PDB entry)
54. Species Wolinella succinogenes [TaxId:844] [189100] (1 PDB entry)
55. Species Xanthomonas axonopodis [TaxId:190486] [225275] (1 PDB entry)
56. Species Xanthomonas axonopodis [TaxId:92829] [225663] (1 PDB entry)
57. Species Yersinia enterocolitica [TaxId:630] [231285] (4 PDB entries)

More info for Family c.94.1.0: automated matches

Timeline for Family c.94.1.0: automated matches:

Family c.94.1.0: automated matches first appeared in SCOPe 2.01
Family c.94.1.0: automated matches appears in SCOPe 2.02
Family c.94.1.0: automated matches appears in SCOPe 2.04
Family c.94.1.0: automated matches appears in the current release, SCOPe 2.08