Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. Superfamily b.85.1: AFP III-like domain [51269] (2 families) (S)
    duplication: consists of two structural repeats related by pseudo dyad
  5. Family b.85.1.1: AFP III-like domain [51270] (4 proteins)
    Pfam PF01354
  6. Protein automated matches [191302] (4 species)
    not a true protein

Species:

  1. Macrozoarces americanus [TaxId:8199] [189997] (1 PDB entry)
  2. Zoarces americanus [TaxId:8199] [268414] (1 PDB entry)
  3. Zoarces elongatus [TaxId:291231] [255465] (8 PDB entries)
    1. Domain for 2lx2:
    2. Domain for 2lx3:
    3. Domains for 5xqn:
      1. Domain d5xqna_: 5xqn A: [352281]
        automated match to d4ur6a_
        complexed with so4
      2. Domain d5xqnb_: 5xqn B: [352254]
        automated match to d4ur6a_
        complexed with so4
    4. Domains for 5xqp:
      1. Domain d5xqpa_: 5xqp A: [352319]
        automated match to d4ur6a_
        complexed with so4
      2. Domain d5xqpb_: 5xqp B: [352332]
        automated match to d4ur6a_
        complexed with so4
      3. Domain d5xqpc_: 5xqp C: [352257]
        automated match to d4ur6a_
        complexed with so4
      4. Domain d5xqpd_: 5xqp D: [352292]
        automated match to d4ur6a_
        complexed with so4
    5. Domains for 5xqr:
      1. Domain d5xqra_: 5xqr A: [352256]
        automated match to d4ur6a_
        complexed with act; mutant
      2. Domain d5xqrb_: 5xqr B: [352264]
        automated match to d4ur6a_
        complexed with act; mutant
    6. Domain for 5xqu:
    7. Domain for 5xqv:
    8. Domain for 5xr0:
  4. Zoarces viviparus [TaxId:48416] [258575] (2 PDB entries)
    1. Domain for 4ur4:
    2. Domains for 4ur6:
      1. Domain d4ur6a_: 4ur6 A: [259307]
        automated match to d2lx3a_
        complexed with so4
      2. Domain d4ur6b_: 4ur6 B: [258576]
        automated match to d2lx3a_
        complexed with so4

More info for Protein automated matches from b.85.1.1: AFP III-like domain

Timeline for Protein automated matches from b.85.1.1: AFP III-like domain: