SCOPe 2.04: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.04
Class a: All alpha proteins [46456] (285 folds)
Fold a.8: immunoglobulin/albumin-binding domain-like [46996] (11 superfamilies)
3 helices; bundle, closed, left-handed twist; up-and-down; mirror topology to the spectrin-like fold
Superfamily a.8.1: Bacterial immunoglobulin/albumin-binding domains [46997] (3 families)
Family a.8.1.1: Immunoglobulin-binding protein A modules [46998] (2 proteins)
automatically mapped to Pfam PF02216
Protein automated matches [191290] (4 species)
not a true protein

Species:

Artificial gene [TaxId:32630] [255483] (1 PDB entry)
- Domain for 2m5a:
  - Domain d2m5ab_: 2m5a B: [243116]
    Other proteins in same PDB: d2m5aa_
    automated match to d1h0ta_
Engineered binding [255533] (1 PDB entry)
- Domains for 2otk:
  1. Domain d2otke_: 2otk E: [243378]
    automated match to d1ss1a_
  2. Domain d2otkf_: 2otk F: [243379]
    automated match to d1ss1a_
Staphylococcus aureus [TaxId:1280] [189943] (10 PDB entries)
1. Domain for 1zxg:
  - Domain d1zxga_: 1zxg A: [241176]
    automated match to d1bdca_
2. Domains for 2b87:
  1. Domain d2b87a_: 2b87 A: [241282]
    automated match to d1h0ta_
  2. Domain d2b87b_: 2b87 B: [241283]
    automated match to d1h0ta_
3. Domain for 2b88:
  - Domain d2b88a_: 2b88 A: [241284]
    automated match to d1h0ta_
4. Domain for 2b89:
  - Domain d2b89a_: 2b89 A: [241285]
    automated match to d1h0ta_
5. Domain for 2kzi:
  - Domain d2kzia_: 2kzi A: [242714]
    automated match to d1h0ta_
6. Domain for 2kzj:
  - Domain d2kzja_: 2kzj A: [242715]
    automated match to d1h0ta_
7. Domains for 3qwo:
  1. Domain d3qwoc_: 3qwo C: [184677]
    Other proteins in same PDB: d3qwob1, d3qwob2, d3qwol1, d3qwol2
    automated match to d1h0ta_
    complexed with edo, so4
  2. Domain d3qwop_: 3qwo P: [184678]
    Other proteins in same PDB: d3qwob1, d3qwob2, d3qwol1, d3qwol2
    automated match to d1h0ta_
    complexed with edo, so4
8. Domain for 4npd:
  - Domain d4npda_: 4npd A: [260512]
    automated match to d1bdca_
    complexed with scn, zn
9. Domain for 4npe:
  - Domain d4npea_: 4npe A: [260194]
    automated match to d1bdca_
    complexed with scn, zn
10. Domains for 4npf:
  1. Domain d4npfx1: 4npf X:2-58 [260510]
    automated match to d1h0ta_
  2. Domain d4npfx2: 4npf X:101-158 [260511]
    automated match to d1h0ta_
  3. Domain d4npfy1: 4npf Y:1-58 [260192]
    automated match to d1h0ta_
  4. Domain d4npfy2: 4npf Y:101-158 [260193]
    automated match to d1h0ta_
Staphylococcus aureus [TaxId:158878] [228180] (3 PDB entries)
1. Domain for 4hjg:
  - Domain d4hjgh_: 4hjg H: [228181]
    Other proteins in same PDB: d4hjga1, d4hjga2, d4hjge_
    automated match to d1h0ta_
2. Domain for 4hkz:
  - Domain d4hkzh_: 4hkz H: [228183]
    Other proteins in same PDB: d4hkza1, d4hkza2, d4hkze_
    automated match to d1h0ta_
    complexed with cl
3. Domain for 4ioi:
  - Domain d4ioih_: 4ioi H: [234889]
    Other proteins in same PDB: d4ioia1, d4ioia2, d4ioie_
    automated match to d4hjgh_

More info for Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules

Timeline for Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules:

Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules first appeared in SCOPe 2.01
Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules appears in SCOPe 2.03
Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules appears in SCOPe 2.05
Protein automated matches from a.8.1.1: Immunoglobulin-binding protein A modules appears in the current release, SCOPe 2.08