Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2967561Fold d.102: Regulatory factor Nef [55670] (1 superfamily)
    alpha(2)-beta(4)-alpha; 3 layers: alpha/beta/alpha
  4. 2967562Superfamily d.102.1: Regulatory factor Nef [55671] (2 families) (S)
  5. 2967563Family d.102.1.1: Regulatory factor Nef [55672] (2 proteins)
    automatically mapped to Pfam PF00469
  6. 2967572Protein automated matches [191288] (2 species)
    not a true protein

Species:

  1. 2967573Hiv-1 m:b_arv2/sf2 [TaxId:11685] [189936] (4 PDB entries)
    1. Domains for 3rbb:
      1. 2967577Domain d3rbba_: 3rbb A: [184875]
        Other proteins in same PDB: d3rbbb_, d3rbbd_
        automated match to d2nefa_
        complexed with edo
      2. 2967578Domain d3rbbc_: 3rbb C: [184876]
        Other proteins in same PDB: d3rbbb_, d3rbbd_
        automated match to d2nefa_
        complexed with edo
    2. Domains for 3rea:
      1. 2967579Domain d3reaa_: 3rea A: [184904]
        Other proteins in same PDB: d3reab_, d3read_
        automated match to d2nefa_
      2. 2967580Domain d3reac_: 3rea C: [184905]
        Other proteins in same PDB: d3reab_, d3read_
        automated match to d2nefa_
    3. Domain for 4orz:
    4. Domains for 4u5w:
      1. 2967574Domain d4u5wa_: 4u5w A: [259122]
        Other proteins in same PDB: d4u5wb1, d4u5wd1, d4u5wd2, d4u5wd3
        automated match to d3reac_
        complexed with iod, mpd
      2. 2967575Domain d4u5wc_: 4u5w C: [259301]
        Other proteins in same PDB: d4u5wb1, d4u5wd1, d4u5wd2, d4u5wd3
        automated match to d3reac_
        complexed with iod, mpd
  2. 2967581Human immunodeficiency virus type 1 [TaxId:11686] [194153] (1 PDB entry)

More info for Protein automated matches from d.102.1.1: Regulatory factor Nef

Timeline for Protein automated matches from d.102.1.1: Regulatory factor Nef: