Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1405985Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 1405986Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 1405987Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 1406849Protein automated matches [191280] (4 species)
    not a true protein

Species:

  1. 1406850Cow (Bos taurus) [TaxId:9913] [225910] (2 PDB entries)
    1. Domain for 2xfx:
    2. Domains for 3l9r:
      1. 1406852Domain d3l9ra1: 3l9r A:3-183 [199717]
        Other proteins in same PDB: d3l9ra2, d3l9rb_, d3l9rc2, d3l9rd_, d3l9re2, d3l9rf_, d3l9rg2, d3l9rh_
        automated match to d1gzpa2
        complexed with cl, gol, l9q, l9r, nag
      2. 1406853Domain d3l9rc1: 3l9r C:3-183 [199719]
        Other proteins in same PDB: d3l9ra2, d3l9rb_, d3l9rc2, d3l9rd_, d3l9re2, d3l9rf_, d3l9rg2, d3l9rh_
        automated match to d1gzpa2
        complexed with cl, gol, l9q, l9r, nag
      3. 1406854Domain d3l9re1: 3l9r E:3-183 [199721]
        Other proteins in same PDB: d3l9ra2, d3l9rb_, d3l9rc2, d3l9rd_, d3l9re2, d3l9rf_, d3l9rg2, d3l9rh_
        automated match to d1gzpa2
        complexed with cl, gol, l9q, l9r, nag
      4. 1406855Domain d3l9rg1: 3l9r G:3-183 [199723]
        Other proteins in same PDB: d3l9ra2, d3l9rb_, d3l9rc2, d3l9rd_, d3l9re2, d3l9rf_, d3l9rg2, d3l9rh_
        automated match to d1gzpa2
        complexed with cl, gol, l9q, l9r, nag
  2. 1406856Homo sapiens, [TaxId:9606] [229907] (1 PDB entry)
  3. 1406858Human (Homo sapiens) [TaxId:9606] [189896] (19 PDB entries)
    1. Domains for 2bc4:
      1. 1406873Domain d2bc4a1: 2bc4 A:13-96 [203578]
        Other proteins in same PDB: d2bc4a2, d2bc4b2, d2bc4c2, d2bc4d2
        automated match to d1hdma2
        complexed with cl
      2. 1406874Domain d2bc4b1: 2bc4 B:3-93 [203580]
        Other proteins in same PDB: d2bc4a2, d2bc4b2, d2bc4c2, d2bc4d2
        automated match to d1hdmb2
        complexed with cl
      3. 1406875Domain d2bc4c1: 2bc4 C:12-96 [203582]
        Other proteins in same PDB: d2bc4a2, d2bc4b2, d2bc4c2, d2bc4d2
        automated match to d1hdma2
        complexed with cl
      4. 1406876Domain d2bc4d1: 2bc4 D:3-93 [203584]
        Other proteins in same PDB: d2bc4a2, d2bc4b2, d2bc4c2, d2bc4d2
        automated match to d1hdmb2
        complexed with cl
    2. Domain for 3bw9:
    3. Domain for 3bwa:
    4. Domain for 3gsn:
    5. Domain for 3gso:
    6. Domain for 3gsq:
    7. Domain for 3gsr:
    8. Domain for 3gsu:
    9. Domain for 3gsv:
    10. Domain for 3gsw:
    11. Domain for 3gsx:
    12. Domains for 3jtc:
      1. 1406861Domain d3jtca_: 3jtc A: [178819]
        Other proteins in same PDB: d3jtcc_, d3jtcd_
        automated match to d1lqvb_
        complexed with ca, mg, nag, ndg, pty
      2. 1406862Domain d3jtcb_: 3jtc B: [178820]
        Other proteins in same PDB: d3jtcc_, d3jtcd_
        automated match to d1lqvb_
        complexed with ca, mg, nag, ndg, pty
    13. Domain for 3pl6:
    14. Domain for 4aen:
    15. Domains for 4fqx:
      1. 1406879Domain d4fqxb1: 4fqx B:-5-92 [221468]
        Other proteins in same PDB: d4fqxa1, d4fqxa2, d4fqxb2, d4fqxc2, d4fqxd2
        automated match to d1klub2
      2. 1406880Domain d4fqxc1: 4fqx C:15-96 [221470]
        Other proteins in same PDB: d4fqxa1, d4fqxa2, d4fqxb2, d4fqxc2, d4fqxd2
        automated match to d1hdma2
      3. 1406881Domain d4fqxd1: 4fqx D:3-93 [221472]
        Other proteins in same PDB: d4fqxa1, d4fqxa2, d4fqxb2, d4fqxc2, d4fqxd2
        automated match to d1hdmb2
    16. Domains for 4grl:
      1. 1406886Domain d4grla1: 4grl A:-1-81 [234508]
        Other proteins in same PDB: d4grla2, d4grlb2, d4grlc1, d4grlc2
        automated match to d4maya1
        complexed with nag
      2. 1406887Domain d4grlb1: 4grl B:3-94 [234510]
        Other proteins in same PDB: d4grla2, d4grlb2, d4grlc1, d4grlc2
        automated match to d4mayb1
        complexed with nag
    17. Domains for 4h25:
      1. 1406871Domain d4h25b1: 4h25 B:3-92 [234610]
        Other proteins in same PDB: d4h25a1, d4h25a2, d4h25b2, d4h25d1, d4h25d2, d4h25e2
        automated match to d4h26e1
        complexed with ipa
      2. 1406872Domain d4h25e1: 4h25 E:3-92 [234612]
        Other proteins in same PDB: d4h25a1, d4h25a2, d4h25b2, d4h25d1, d4h25d2, d4h25e2
        automated match to d4h26e1
        complexed with ipa
    18. Domains for 4h26:
      1. 1406882Domain d4h26b1: 4h26 B:3-92 [234614]
        Other proteins in same PDB: d4h26a1, d4h26a2, d4h26b2, d4h26d1, d4h26d2, d4h26e2
        automated match to d4h26e1
      2. 1406883Domain d4h26e1: 4h26 E:3-92 [228344]
        Other proteins in same PDB: d4h26a1, d4h26a2, d4h26b2, d4h26d1, d4h26d2, d4h26e2
        automated match to d2sebb2
    19. Domains for 4may:
      1. 1406877Domain d4maya1: 4may A:0-81 [228549]
        Other proteins in same PDB: d4maya2, d4mayb2, d4mayc1, d4mayc2
        automated match to d1uvqa2
        complexed with so4
      2. 1406878Domain d4mayb1: 4may B:3-94 [228556]
        Other proteins in same PDB: d4maya2, d4mayb2, d4mayc1, d4mayc2
        automated match to d1jk8b2
        complexed with so4
  4. 1406888Mouse (Mus musculus) [TaxId:10090] [225821] (1 PDB entry)

More info for Protein automated matches from d.19.1.1: MHC antigen-recognition domain

Timeline for Protein automated matches from d.19.1.1: MHC antigen-recognition domain: