Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1944478Fold d.211: beta-hairpin-alpha-hairpin repeat [74651] (2 superfamilies)
    multiple repeats of beta(2)-alpha(2) motif
  4. 1944479Superfamily d.211.1: Ankyrin repeat [48403] (2 families) (S)
    repeats organized in elongated structures
  5. 1944620Family d.211.1.0: automated matches [191667] (1 protein)
    not a true family
  6. 1944621Protein automated matches [191267] (5 species)
    not a true protein

Species:

  1. 1944622Acinetobacter baumannii [TaxId:509173] [276553] (1 PDB entry)
  2. 1944627Artificial gene [TaxId:32630] [194542] (2 PDB entries)
    1. Domains for 4hb5:
      1. 1944628Domain d4hb5a_: 4hb5 A: [194544]
        automated match to d3q9nc_
      2. 1944629Domain d4hb5b_: 4hb5 B: [194543]
        automated match to d3q9nc_
    2. Domain for 4hna:
  3. 1944631Escherichia coli [TaxId:562] [228444] (2 PDB entries)
    1. Domain for 2l6b:
    2. Domain for 4hll:
  4. 1944634Human (Homo sapiens) [TaxId:9606] [189837] (18 PDB entries)
    1. Domains for 2b0o:
      1. 1944660Domain d2b0oe2: 2b0o E:545-687 [203520]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      2. 1944661Domain d2b0of2: 2b0o F:545-697 [203522]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      3. 1944662Domain d2b0og2: 2b0o G:546-681 [203524]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      4. 1944663Domain d2b0oh2: 2b0o H:547-694 [203526]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
    2. Domain for 2kbx:
    3. Domains for 3b7b:
      1. 1944672Domain d3b7ba_: 3b7b A: [154927]
        automated match to d4uuca_
        complexed with so4
      2. 1944673Domain d3b7bb_: 3b7b B: [262263]
        automated match to d4uuca_
        complexed with so4
    4. Domains for 3b95:
      1. 1944670Domain d3b95a_: 3b95 A: [264703]
        automated match to d4uuca_
        complexed with so4
      2. 1944671Domain d3b95b_: 3b95 B: [264704]
        automated match to d4uuca_
        complexed with so4
    5. Domains for 3eu9:
      1. 1944657Domain d3eu9a_: 3eu9 A: [209666]
        automated match to d2dznc_
        complexed with gol, his, so4
      2. 1944658Domain d3eu9b_: 3eu9 B: [209667]
        automated match to d2dznc_
        complexed with gol, his, so4
      3. 1944659Domain d3eu9c_: 3eu9 C: [209668]
        automated match to d2dznc_
        complexed with gol, his, so4
    6. Domain for 3f6q:
    7. Domain for 3so8:
    8. Domains for 3twq:
      1. 1944655Domain d3twqa_: 3twq A: [185971]
        automated match to d1awcb_
        complexed with gol, so4
      2. 1944656Domain d3twqb_: 3twq B: [185972]
        automated match to d1awcb_
        complexed with gol, so4
    9. Domains for 3twr:
      1. 1944637Domain d3twra_: 3twr A: [185973]
        automated match to d1awcb_
        complexed with pe8, so4
      2. 1944638Domain d3twrb_: 3twr B: [185974]
        automated match to d1awcb_
        complexed with pe8, so4
      3. 1944639Domain d3twrc_: 3twr C: [185975]
        automated match to d1awcb_
        complexed with pe8, so4
      4. 1944640Domain d3twrd_: 3twr D: [185976]
        automated match to d1awcb_
        complexed with pe8, so4
    10. Domains for 3tws:
      1. 1944642Domain d3twsa_: 3tws A: [185977]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      2. 1944643Domain d3twsb_: 3tws B: [185978]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      3. 1944644Domain d3twsc_: 3tws C: [185979]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      4. 1944645Domain d3twsd_: 3tws D: [185980]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
    11. Domains for 3twt:
      1. 1944647Domain d3twta_: 3twt A: [185981]
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      2. 1944648Domain d3twtb_: 3twt B: [185982]
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      3. 1944649Domain d3twtc_: 3twt C: [185983]
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      4. 1944650Domain d3twtd_: 3twt D: [185984]
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
    12. Domain for 3twu:
    13. Domains for 3twv:
      1. 1944666Domain d3twva_: 3twv A: [185986]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      2. 1944667Domain d3twvb_: 3twv B: [185987]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      3. 1944668Domain d3twvc_: 3twv C: [185988]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      4. 1944669Domain d3twvd_: 3twv D: [185989]
        automated match to d1awcb_
        complexed with edo, pe8, so4
    14. Domains for 3tww:
      1. 1944664Domain d3twwa_: 3tww A: [185990]
        automated match to d1awcb_
        complexed with so4
      2. 1944665Domain d3twwb_: 3tww B: [185991]
        automated match to d1awcb_
        complexed with so4
    15. Domains for 3twx:
      1. 1944651Domain d3twxa_: 3twx A: [185992]
        automated match to d1awcb_
        complexed with edo, p6g, so4
      2. 1944652Domain d3twxb_: 3twx B: [185993]
        automated match to d1awcb_
        complexed with edo, p6g, so4
    16. Domain for 4hi8:
    17. Domain for 4hi9:
    18. Domain for 4uuc:
  5. 1944675Thale cress (Arabidopsis thaliana) [TaxId:3702] [260051] (1 PDB entry)

More info for Protein automated matches from d.211.1.0: automated matches

Timeline for Protein automated matches from d.211.1.0: automated matches: