Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2563231Fold d.211: beta-hairpin-alpha-hairpin repeat [74651] (2 superfamilies)
    multiple repeats of beta(2)-alpha(2) motif
  4. 2563232Superfamily d.211.1: Ankyrin repeat [48403] (2 families) (S)
    repeats organized in elongated structures
  5. 2563379Family d.211.1.0: automated matches [191667] (1 protein)
    not a true family
  6. 2563380Protein automated matches [191267] (7 species)
    not a true protein

Species:

  1. 2563381Acinetobacter baumannii [TaxId:509173] [276553] (1 PDB entry)
  2. 2563386Artificial gene [TaxId:32630] [194542] (2 PDB entries)
    1. Domains for 4hb5:
      1. 2563387Domain d4hb5a_: 4hb5 A: [194544]
        Other proteins in same PDB: d4hb5b2
        automated match to d3q9nc_
      2. 2563388Domain d4hb5b1: 4hb5 B:2-161 [194543]
        Other proteins in same PDB: d4hb5b2
        automated match to d3q9nc_
    2. Domain for 4hna:
  3. 2563390Enterococcus faecalis [TaxId:1351] [311295] (1 PDB entry)
  4. 2563393Escherichia coli [TaxId:562] [228444] (2 PDB entries)
    1. Domain for 2l6b:
    2. Domain for 4hll:
  5. 2563396Human (Homo sapiens) [TaxId:9606] [189837] (21 PDB entries)
    1. Domains for 2b0o:
      1. 2563423Domain d2b0oe2: 2b0o E:545-687 [203520]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      2. 2563424Domain d2b0of2: 2b0o F:545-697 [203522]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      3. 2563425Domain d2b0og2: 2b0o G:546-681 [203524]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
      4. 2563426Domain d2b0oh2: 2b0o H:547-694 [203526]
        Other proteins in same PDB: d2b0oe1, d2b0of1, d2b0og1, d2b0oh1
        automated match to d1dcqa1
        complexed with zn
    2. Domain for 2kbx:
    3. Domains for 3b7b:
      1. 2563437Domain d3b7ba2: 3b7b A:734-967 [154927]
        Other proteins in same PDB: d3b7ba3
        automated match to d4uuca_
        complexed with so4
      2. 2563438Domain d3b7bb_: 3b7b B: [262263]
        Other proteins in same PDB: d3b7ba3
        automated match to d4uuca_
        complexed with so4
    4. Domains for 3b95:
      1. 2563435Domain d3b95a1: 3b95 A:734-967 [264703]
        Other proteins in same PDB: d3b95a2
        automated match to d4uuca_
        complexed with so4
      2. 2563436Domain d3b95b_: 3b95 B: [264704]
        Other proteins in same PDB: d3b95a2
        automated match to d4uuca_
        complexed with so4
    5. Domains for 3eu9:
      1. 2563420Domain d3eu9a1: 3eu9 A:51-281 [209666]
        Other proteins in same PDB: d3eu9a2
        automated match to d2dznc_
        complexed with gol, his, so4
      2. 2563421Domain d3eu9b_: 3eu9 B: [209667]
        Other proteins in same PDB: d3eu9a2
        automated match to d2dznc_
        complexed with gol, his, so4
      3. 2563422Domain d3eu9c_: 3eu9 C: [209668]
        Other proteins in same PDB: d3eu9a2
        automated match to d2dznc_
        complexed with gol, his, so4
    6. Domain for 3f6q:
    7. Domain for 3so8:
    8. Domains for 3twq:
      1. 2563418Domain d3twqa1: 3twq A:484-644 [185971]
        Other proteins in same PDB: d3twqa2, d3twqb2
        automated match to d1awcb_
        complexed with gol, so4
      2. 2563419Domain d3twqb1: 3twq B:484-644 [185972]
        Other proteins in same PDB: d3twqa2, d3twqb2
        automated match to d1awcb_
        complexed with gol, so4
    9. Domains for 3twr:
      1. 2563399Domain d3twra_: 3twr A: [185973]
        Other proteins in same PDB: d3twrd2
        automated match to d1awcb_
        complexed with pe8, so4
      2. 2563400Domain d3twrb_: 3twr B: [185974]
        Other proteins in same PDB: d3twrd2
        automated match to d1awcb_
        complexed with pe8, so4
      3. 2563401Domain d3twrc_: 3twr C: [185975]
        Other proteins in same PDB: d3twrd2
        automated match to d1awcb_
        complexed with pe8, so4
      4. 2563402Domain d3twrd1: 3twr D:488-644 [185976]
        Other proteins in same PDB: d3twrd2
        automated match to d1awcb_
        complexed with pe8, so4
    10. Domains for 3tws:
      1. 2563404Domain d3twsa_: 3tws A: [185977]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      2. 2563405Domain d3twsb_: 3tws B: [185978]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      3. 2563406Domain d3twsc_: 3tws C: [185979]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
      4. 2563407Domain d3twsd_: 3tws D: [185980]
        automated match to d1awcb_
        complexed with edo, p6g, pe8, so4
    11. Domains for 3twt:
      1. 2563409Domain d3twta_: 3twt A: [185981]
        Other proteins in same PDB: d3twtc2, d3twtd2
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      2. 2563410Domain d3twtb_: 3twt B: [185982]
        Other proteins in same PDB: d3twtc2, d3twtd2
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      3. 2563411Domain d3twtc1: 3twt C:488-644 [185983]
        Other proteins in same PDB: d3twtc2, d3twtd2
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
      4. 2563412Domain d3twtd1: 3twt D:488-644 [185984]
        Other proteins in same PDB: d3twtc2, d3twtd2
        automated match to d1awcb_
        complexed with 2pe, edo, pe8, so4
    12. Domain for 3twu:
    13. Domains for 3twv:
      1. 2563429Domain d3twva_: 3twv A: [185986]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      2. 2563430Domain d3twvb_: 3twv B: [185987]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      3. 2563431Domain d3twvc_: 3twv C: [185988]
        automated match to d1awcb_
        complexed with edo, pe8, so4
      4. 2563432Domain d3twvd_: 3twv D: [185989]
        automated match to d1awcb_
        complexed with edo, pe8, so4
    14. Domains for 3tww:
      1. 2563427Domain d3twwa_: 3tww A: [185990]
        Other proteins in same PDB: d3twwb2
        automated match to d1awcb_
        complexed with so4
      2. 2563428Domain d3twwb1: 3tww B:488-643 [185991]
        Other proteins in same PDB: d3twwb2
        automated match to d1awcb_
        complexed with so4
    15. Domains for 3twx:
      1. 2563413Domain d3twxa1: 3twx A:488-644 [185992]
        Other proteins in same PDB: d3twxa2, d3twxb2
        automated match to d1awcb_
        complexed with edo, p6g, so4
      2. 2563414Domain d3twxb1: 3twx B:488-644 [185993]
        Other proteins in same PDB: d3twxa2, d3twxb2
        automated match to d1awcb_
        complexed with edo, p6g, so4
    16. Domain for 4hi8:
    17. Domain for 4hi9:
    18. Domain for 4uuc:
    19. Domain for 5gik:
    20. Domains for 5y4f:
      1. 2563433Domain d5y4fa_: 5y4f A: [339029]
        automated match to d1n11a_
        complexed with act, ca
      2. 2563434Domain d5y4fb_: 5y4f B: [339024]
        automated match to d1n11a_
        complexed with act, ca
    21. Domains for 6iyb:
      1. 3065949Domain d6iybb1: 6iyb B:5-138 [366011]
        Other proteins in same PDB: d6iyba_, d6iybb2, d6iybc_, d6iybd2
        automated match to d2kxpc_
        complexed with gtp, mg
      2. 3065951Domain d6iybd1: 6iyb D:5-137 [366013]
        Other proteins in same PDB: d6iyba_, d6iybb2, d6iybc_, d6iybd2
        automated match to d2kxpc_
        complexed with gtp, mg
  6. 2563440Thale cress (Arabidopsis thaliana) [TaxId:3702] [260051] (2 PDB entries)
    1. Domains for 4tum:
      1. 2563442Domain d4tuma_: 4tum A: [260053]
        automated match to d3hg0d_
      2. 2563443Domain d4tumb_: 4tum B: [263925]
        automated match to d4tuma_
      3. 2563444Domain d4tumc_: 4tum C: [263926]
        automated match to d4tuma_
      4. 2563445Domain d4tumd_: 4tum D: [260052]
        automated match to d3hg0d_
      5. 2563446Domain d4tume_: 4tum E: [263927]
        automated match to d4tuma_
    2. Domain for 5eid:
  7. 3055818Mus musculus [TaxId:10090] [355880] (2 PDB entries)
    1. Domains for 5z2m:
      1. 3055820Domain d5z2mb1: 5z2m B:1-136 [355882]
        Other proteins in same PDB: d5z2ma_, d5z2mb2, d5z2mc_, d5z2md2
        automated match to d4drxe_
        complexed with gtp, mg
      2. 3055851Domain d5z2md1: 5z2m D:1-134 [355913]
        Other proteins in same PDB: d5z2ma_, d5z2mb2, d5z2mc_, d5z2md2
        automated match to d4drxe_
        complexed with gtp, mg
    2. Domains for 5z2n:
      1. 3055819Domain d5z2na_: 5z2n A: [355881]
        automated match to d4drxe_
      2. 3055826Domain d5z2nb_: 5z2n B: [355888]
        automated match to d4drxe_

More info for Protein automated matches from d.211.1.0: automated matches

Timeline for Protein automated matches from d.211.1.0: automated matches: