SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.250: IpaD-like [140692] (1 superfamily)
6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest
Superfamily a.250.1: IpaD-like [140693] (2 families)
Family a.250.1.1: IpaD-like [140694] (3 proteins)
Pfam PF06511
Protein automated matches [191266] (1 species)
not a true protein

Species:

Shigella flexneri [TaxId:623] [189835] (7 PDB entries)
1. Domain for 2j0o:
  - Domain d2j0ob_: 2j0o B: [137902]
    Other proteins in same PDB: d2j0oa1
    automated match to d2j0oa1
    complexed with gol
2. Domain for 2jaa:
  - Domain d2jaab_: 2jaa B: [138239]
    Other proteins in same PDB: d2jaaa1
    automated match to d3r9va_
3. Domains for 3r9v:
  1. Domain d3r9va_: 3r9v A: [184866]
    automated match to d2j0oa1
    complexed with dxc, gol
  2. Domain d3r9vb_: 3r9v B: [184867]
    automated match to d2j0oa1
    complexed with dxc, gol
4. Domains for 5vxj:
  1. Domain d5vxja_: 5vxj A: [338806]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1
  2. Domain d5vxjc_: 5vxj C: [338774]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1
  3. Domain d5vxje_: 5vxj E: [338794]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1
  4. Domain d5vxjg_: 5vxj G: [338768]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1
  5. Domain d5vxji_: 5vxj I: [338782]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1
5. Domain for 5vxk:
  - Domain d5vxka_: 5vxk A: [338790]
    Other proteins in same PDB: d5vxkb_
    automated match to d2j0oa1
6. Domain for 5vxl:
  - Domain d5vxla_: 5vxl A: [338787]
    Other proteins in same PDB: d5vxlb_
    automated match to d2j0oa1
7. Domain for 5vxm:
  - Domain d5vxma_: 5vxm A: [338772]
    Other proteins in same PDB: d5vxmb_
    automated match to d2j0oa1

More info for Protein automated matches from a.250.1.1: IpaD-like

Timeline for Protein automated matches from a.250.1.1: IpaD-like:

Protein automated matches from a.250.1.1: IpaD-like first appeared in SCOPe 2.01
Protein automated matches from a.250.1.1: IpaD-like appears in SCOPe 2.05
Protein automated matches from a.250.1.1: IpaD-like appears in SCOPe 2.07
Protein automated matches from a.250.1.1: IpaD-like appears in the current release, SCOPe 2.08