Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2444630Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 2444631Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (7 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 2444911Family c.31.1.5: Sir2 family of transcriptional regulators [63984] (8 protein domains)
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. 2445000Protein automated matches [191258] (3 species)
    not a true protein

Species:

  1. 2445001Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225225] (2 PDB entries)
    1. Domain for 2od7:
    2. Domain for 2od9:
  2. 2445004Human (Homo sapiens) [TaxId:9606] [189817] (4 PDB entries)
    1. Domains for 3rig:
      1. 2445012Domain d3riga1: 3rig A:34-302 [184982]
        Other proteins in same PDB: d3riga2, d3rigb2
        automated match to d2b4ya1
        complexed with nhe, zn
      2. 2445013Domain d3rigb1: 3rig B:34-302 [184983]
        Other proteins in same PDB: d3riga2, d3rigb2
        automated match to d2b4ya1
        complexed with nhe, zn
    2. Domains for 3riy:
      1. 2445005Domain d3riya1: 3riy A:34-302 [184995]
        Other proteins in same PDB: d3riya2, d3riyb2
        automated match to d2b4ya1
        complexed with nad, zn
      2. 2445006Domain d3riyb1: 3riy B:34-302 [184996]
        Other proteins in same PDB: d3riya2, d3riyb2
        automated match to d2b4ya1
        complexed with nad, zn
    3. Domains for 3zgo:
      1. 2445009Domain d3zgoa1: 3zgo A:34-356 [201313]
        Other proteins in same PDB: d3zgoa2, d3zgob2
        automated match to d3zgob_
        complexed with edo, eoh, p6g, pge, zn
      2. 2445010Domain d3zgob1: 3zgo B:34-356 [197057]
        Other proteins in same PDB: d3zgoa2, d3zgob2
        automated match to d1j8fa_
        complexed with edo, eoh, p6g, pge, zn
      3. 2445011Domain d3zgoc_: 3zgo C: [201314]
        Other proteins in same PDB: d3zgoa2, d3zgob2
        automated match to d3zgob_
        complexed with edo, eoh, p6g, pge, zn
    4. Domains for 3zgv:
      1. 2445007Domain d3zgva_: 3zgv A: [197061]
        automated match to d1j8fa_
        complexed with act, ar6, gol, pge, zn
      2. 2445008Domain d3zgvb_: 3zgv B: [201315]
        automated match to d3zgva_
        complexed with act, ar6, gol, pge, zn
  3. 2445014Zebrafish (Danio rerio) [TaxId:7955] [340828] (2 PDB entries)
    1. Domain for 6enx:
    2. Domains for 6eo0:
      1. 2445016Domain d6eo0a1: 6eo0 A:28-298 [340980]
        Other proteins in same PDB: d6eo0a2, d6eo0b2, d6eo0c2, d6eo0d2
        automated match to d2b4ya1
        complexed with bv8, bvt, edo, zn
      2. 2445017Domain d6eo0b1: 6eo0 B:28-298 [340831]
        Other proteins in same PDB: d6eo0a2, d6eo0b2, d6eo0c2, d6eo0d2
        automated match to d2b4ya1
        complexed with bv8, bvt, edo, zn
      3. 2445018Domain d6eo0c1: 6eo0 C:28-298 [340832]
        Other proteins in same PDB: d6eo0a2, d6eo0b2, d6eo0c2, d6eo0d2
        automated match to d2b4ya1
        complexed with bv8, bvt, edo, zn
      4. 2445019Domain d6eo0d1: 6eo0 D:28-298 [340829]
        Other proteins in same PDB: d6eo0a2, d6eo0b2, d6eo0c2, d6eo0d2
        automated match to d2b4ya1
        complexed with bv8, bvt, edo, zn

More info for Protein automated matches from c.31.1.5: Sir2 family of transcriptional regulators

Timeline for Protein automated matches from c.31.1.5: Sir2 family of transcriptional regulators: